RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PASD1Q8IV76 773 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 REREQ9P2R6 1566 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 STX1BP61266 288 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 TFAP4Q01664 338 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 TBC1D8BQ0IIM8 1120 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 CUL4AQ13619 759 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 ABHD8Q96I13 439 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 ELAC2Q9BQ52 826 aaKnown RBP5.38□□□□□ -1.55
VPS13D-213ENST00000613099 RAB34Q9BZG1 259 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 GHRP10912 638 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 CTNNA2P26232 953 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 MAGEA1P43355 309 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 KPNA4O00629 521 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-213ENST00000613099 TRPC1P48995 793 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 AARSP49588 968 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS13D-213ENST00000613099 TEFQ10587 303 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 TMEM110Q86TL2 294 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 STKLD1Q8NE28 680 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 CAAP1Q9H8G2 361 aa5.38□□□□□ -1.55
VPS13D-213ENST00000613099 SETD1AO15047 1707 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 NUTM2FA1L443 756 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GOLGA8IPA6NC78 632 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GUCY1A3Q02108 690 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 CBX3Q13185 183 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 C11orf91Q3C1V1 193 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 NAA35Q5VZE5 725 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 NUTM2GQ5VZR2 741 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 PPP4R1Q8TF05 950 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 SEC16BQ96JE7 1060 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RAD21L1Q9H4I0 556 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 KDM5CP41229 1560 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 DEAF1O75398 565 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 HOXB7P09629 217 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 SLC9C1Q4G0N8 1177 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 TMCO4Q5TGY1 634 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 LENG1Q96BZ8 264 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 ZFRQ96KR1 1074 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 MTA3Q9BTC8 594 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 USP40Q9NVE5 1235 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 THRAP3Q9Y2W1 955 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 SLC12A7Q9Y666 1083 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 TRIM50Q86XT4 487 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 ANKRD44Q8N8A2 993 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 CDHR1Q96JP9 859 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 KCND1Q9NSA2 647 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 BZW2Q9Y6E2 419 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 DCAF8L1A6NGE4 600 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 MARK3P27448 753 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 PMS2P54278 862 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 AK2P54819 239 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 TTF1Q15361 905 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 THEMIS2Q5TEJ8 643 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RASSF3Q86WH2 238 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 PDZD8Q8NEN9 1154 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 KLHL25Q9H0H3 589 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 NQO1P15559 274 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 VHLP40337 213 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 EEF2P13639 858 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 TCOF1Q13428 1488 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 KLHL7Q8IXQ5 586 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GALNT15Q8N3T1 639 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 TCP11L1Q9NUJ3 509 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RAPGEF3O95398 923 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GAS8O95995 478 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RGS2P41220 211 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 MYOCDQ8IZQ8 938 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RBM41Q96IZ5 413 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GALNT8Q9NY28 637 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 FBXO9Q9UK97 447 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 SYNPO2Q9UMS6 1093 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GOLGA8QA0A0J9YX86 632 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GOLGA8OA6NCC3 632 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 GOLGA8NF8WBI6 632 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 BIRC5O15392 142 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 FMNL1O95466 1100 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 CCNI2Q6ZMN8 369 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 LTV1Q96GA3 475 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 CCDC85AQ96PX6 553 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 MTRQ99707 1265 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 PCDH18Q9HCL0 1135 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 FAM69CQ0P6D2 419 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 MAP3K12Q12852 859 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 CWF19L2Q2TBE0 894 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 OSBPL10Q9BXB5 764 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 UBA7P41226 1012 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RRS1Q15050 365 aaKnown RBP5.37□□□□□ -1.55
VPS13D-213ENST00000613099 SPATA7Q9P0W8 599 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 FAM135BQ49AJ0 1406 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RASSF5Q8WWW0 418 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 ZBED2Q9BTP6 218 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 EURLQ9NYK6 297 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 TEKT2Q9UIF3 430 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 CD109Q6YHK3 1445 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 ZNF839A8K0R7 811 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RSPH10B2B2RC85 870 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 AREL1O15033 823 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 ZMYND10O75800 440 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 RSPH10BP0C881 870 aa5.37□□□□□ -1.55
VPS13D-213ENST00000613099 HSPA1LP34931 641 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms