RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RESTQ13127 1097 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 MIER3Q7Z3K6 550 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 KRT25Q7Z3Z0 450 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 RPAINQ86UA6 219 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 SMYD4Q8IYR2 804 aaPredicted RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 CAPZA3Q96KX2 299 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 IQCA1LA6NCM1 817 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 ADM5C9JUS6 153 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 CABP7Q86V35 215 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 OSBPL5Q9H0X9 879 aaPredicted RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 AFDNP55196 1824 aaKnown RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 CTAGE15A4D2H0 777 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 SFI1A8K8P3 1242 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 CTAGE8P0CG41 777 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 KIF22Q14807 665 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 CTAGE6Q86UF2 777 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 CTAGE4Q8IX94 777 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 TRIM6Q9C030 488 aaPredicted RBP12.01□□□□□ -0.49
FAM3A-221ENST00000612856 GBP3Q9H0R5 595 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 PCDHB13Q9Y5F0 798 aa12.01□□□□□ -0.49
FAM3A-221ENST00000612856 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 USO1O60763 962 aaKnown RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 ZMYND10O75800 440 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 NOP2P46087 812 aaKnown RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 FAM160A1Q05DH4 1040 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 SF3A3Q12874 501 aaKnown RBP eCLIP12□□□□□ -0.49
FAM3A-221ENST00000612856 RAPGEF1Q13905 1077 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 BRDTQ58F21 947 aaPredicted RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 NEK8Q86SG6 692 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 AFAP1L1Q8TED9 768 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 SYT17Q9BSW7 474 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 FAM49AQ9H0Q0 323 aaPredicted RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 DDX25Q9UHL0 483 aaKnown RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 GCNT3O95395 438 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 TBC1D8O95759 1140 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 CCDC172P0C7W6 258 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 FAM102BQ5T8I3 360 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 CCDC70Q6NSX1 233 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 KCNB2Q92953 911 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 CEP83Q9Y592 693 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 PCDHB6Q9Y5E3 794 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 CAPN7Q9Y6W3 813 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 PRPF4BQ13523 1007 aaKnown RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 C12orf60Q5U649 245 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 FBXW10Q5XX13 1052 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 MCTP2Q6DN12 878 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 ARMCX5Q6P1M9 558 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 OTUD6BQ8N6M0 293 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 SWAP70Q9UH65 585 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 KIAA1024Q9UPX6 916 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 DNM3Q9UQ16 869 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
FAM3A-221ENST00000612856 URB1O60287 2271 aaKnown RBP12□□□□□ -0.49
FAM3A-221ENST00000612856 LRRC41Q15345 812 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
FAM3A-221ENST00000612856 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 BMP15O95972 392 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 OSTNP61366 133 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 MUM1L1Q5H9M0 696 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 CCDC127Q96BQ5 260 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 LRRIQ4A6NIV6 560 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 KRT19P08727 400 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 CALRP27797 417 aaKnown RBP11.99□□□□□ -0.49
FAM3A-221ENST00000612856 SLC30A10Q6XR72 485 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 WDR24Q96S15 920 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 LLPHQ9BRT6 129 aaKnown RBP11.99□□□□□ -0.49
FAM3A-221ENST00000612856 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
FAM3A-221ENST00000612856 SUFUQ9UMX1 484 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 MRC1P22897 1456 aa11.99□□□□□ -0.49
FAM3A-221ENST00000612856 H3BQF6 201 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 AKR1B10O60218 316 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 TADA3O75528 432 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 FDPSP14324 419 aaKnown RBP11.98□□□□□ -0.49
FAM3A-221ENST00000612856 CYP2B6P20813 491 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
FAM3A-221ENST00000612856 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 LRCH2Q5VUJ6 765 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 STYK1Q6J9G0 422 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 PIGOQ8TEQ8 1089 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 ABCB6Q9NP58 842 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 SLC39A2Q9NP94 309 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
FAM3A-221ENST00000612856 CTNND2Q9UQB3 1225 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 KCPQ6ZWJ8 1503 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 CYP2J2P51589 502 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 NFX1Q12986 1120 aaKnown RBP11.98□□□□□ -0.49
FAM3A-221ENST00000612856 NAA25Q14CX7 972 aa11.98□□□□□ -0.49
FAM3A-221ENST00000612856 IQCB1Q15051 598 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms