RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LRRC31Q6UY01 552 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 MMTAG2Q9BU76 263 aaKnown RBP15.62■□□□□ 0.09
COL6A1-207ENST00000612273 RASSF4Q9H2L5 321 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 DUOX1Q9NRD9 1551 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 A0A1W2PQC6 194 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 TRAF5O00463 557 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 FTCDO95954 541 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 PCP11498 1178 aaKnown RBP15.62■□□□□ 0.09
COL6A1-207ENST00000612273 TUBB2AQ13885 445 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 CALCRLQ16602 461 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 DHTKD1Q96HY7 919 aaPredicted RBP15.62■□□□□ 0.09
COL6A1-207ENST00000612273 TUBB2BQ9BVA1 445 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 CCSER1Q9C0I3 900 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 CENPHQ9H3R5 247 aa15.62■□□□□ 0.09
COL6A1-207ENST00000612273 SHANK3Q9BYB0 1731 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 USO1O60763 962 aaKnown RBP15.61■□□□□ 0.09
COL6A1-207ENST00000612273 TACC1O75410 805 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 KCNB1Q14721 858 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 TMED8Q6PL24 325 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-207ENST00000612273 EP400Q96L91 3159 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 TULP2O00295 520 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 RIMBP2O15034 1052 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 VAV2P52735 878 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 MAP9Q49MG5 647 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 CCDC40Q4G0X9 1142 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 SRLQ86TD4 932 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 FLT1P17948 1338 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 PAPPAQ13219 1627 aa15.61■□□□□ 0.09
COL6A1-207ENST00000612273 ITGB4P16144 1822 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 NPHP3-ACAD11A0A0J9YXS1 232 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 MPHOSPH10O00566 681 aaKnown RBP15.6■□□□□ 0.09
COL6A1-207ENST00000612273 SLC1A4P43007 532 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 ATP1A2P50993 1020 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 GUCY2FP51841 1108 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 CKAP4Q07065 602 aaKnown RBP15.6■□□□□ 0.09
COL6A1-207ENST00000612273 SBK1Q52WX2 424 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 PAPD7Q5XG87 772 aaKnown RBP15.6■□□□□ 0.09
COL6A1-207ENST00000612273 ANKRD2Q9GZV1 360 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 GOLGA6CA6NDK9 693 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 M0R2N6 131 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 UFL1O94874 794 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 GOLGA6DP0CG33 693 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 AMPD3Q01432 767 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 SPTY2D1Q68D10 685 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-207ENST00000612273 TTBK2Q6IQ55 1244 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 CCDC70Q6NSX1 233 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 CNNM4Q6P4Q7 775 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 SH2D3CQ8N5H7 860 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 DDX12PQ92771 950 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 FGFBP2Q9BYJ0 223 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 GOLGA6AQ9NYA3 693 aa15.6■□□□□ 0.09
COL6A1-207ENST00000612273 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 EIF3CLB5ME19 914 aaKnown RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 GNA11P29992 359 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 GRB10Q13322 594 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 VWA3BQ502W6 1294 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 MUM1L1Q5H9M0 696 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 WDR93Q6P2C0 686 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 CLEC4GQ6UXB4 293 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 CCNI2Q6ZMN8 369 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 KRT25Q7Z3Z0 450 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 EHBP1Q8NDI1 1231 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 LARP4BQ92615 738 aaKnown RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 EIF3CQ99613 913 aaKnown RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 SPATA31A1Q5TZJ5 1347 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 MYH14Q7Z406 1995 aaKnown RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 CCT5P48643 541 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 POLR2FP61218 127 aaKnown RBP15.59■□□□□ 0.09
COL6A1-207ENST00000612273 FAM114A1Q8IWE2 563 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 SPATA4Q8NEY3 305 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 MTMR8Q96EF0 704 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 SAMM50Q9Y512 469 aa15.59■□□□□ 0.09
COL6A1-207ENST00000612273 FAM196BA6NMK8 535 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 C6orf229H3BNL8 230 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 ZEB2O60315 1214 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 MEA1Q16626 185 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 MFSD14BQ5SR56 506 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 CERS3Q8IU89 383 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 CREG2Q8IUH2 290 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 FAM107BQ9H098 131 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 BLOC1S4Q9NUP1 217 aa15.58■□□□□ 0.09
COL6A1-207ENST00000612273 SNAP25P60880 206 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 RAPGEF1Q13905 1077 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 TRADDQ15628 312 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 OSBPL9Q96SU4 736 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 NUP58Q9BVL2 599 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 ZMYND12Q9H0C1 365 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 SH3GLB2Q9NR46 395 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 SNX12Q9UMY4 172 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 MYH10P35580 1976 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.58■□□□□ 0.08
COL6A1-207ENST00000612273 ECM1Q16610 540 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 KCTD1Q719H9 257 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 RUFY1Q96T51 708 aa15.58■□□□□ 0.08
COL6A1-207ENST00000612273 MXD3Q9BW11 206 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms