RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 SCAF8Q9UPN6 1271 aaKnown RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 RIPK3Q9Y572 518 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 IVNS1ABPQ9Y6Y0 642 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 MYH9P35579 1960 aaKnown RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 BECN1Q14457 450 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 CDC37Q16543 378 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 PAXIP1Q6ZW49 1069 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 ZNF654Q8IZM8 581 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 NSUN6Q8TEA1 469 aaKnown RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 KATNAL1Q9BW62 490 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 BARHL2Q9NY43 387 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 ARVCFO00192 962 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 CCND3P30281 292 aaPredicted RBP8.3□□□□□ -1.08
CBWD1-219ENST00000611457 ATP2B2Q01814 1243 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 ANKRD1Q15327 319 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 CCDC174Q6PII3 467 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 CRIPAKQ8N1N5 446 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 SCFD2Q8WU76 684 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 TNFRSF25Q93038 417 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 RHOBTB2Q9BYZ6 727 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 EHMT1Q9H9B1 1298 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 SNX14Q9Y5W7 946 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 TNRC18O15417 2968 aaPredicted RBP8.3□□□□□ -1.08
CBWD1-219ENST00000611457 MEIS2O14770 477 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 PFKFB2O60825 505 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 SETQ01105 290 aaPredicted RBP8.3□□□□□ -1.08
CBWD1-219ENST00000611457 LAMC2Q13753 1193 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 WTAPQ15007 396 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 PCBP1Q15365 356 aaKnown RBP eCLIP8.3□□□□□ -1.08
CBWD1-219ENST00000611457 IFIT1BQ5T764 474 aaKnown RBP8.3□□□□□ -1.08
CBWD1-219ENST00000611457 APOA5Q6Q788 366 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 PLPPR4Q7Z2D5 763 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 RNF180Q86T96 592 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 PDLIM7Q9NR12 457 aa8.3□□□□□ -1.08
CBWD1-219ENST00000611457 TMEM232C9JQI7 657 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 LYPLA2O95372 231 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 SLURP2P0DP57 97 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 PTK7Q13308 1070 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 QRICH1Q2TAL8 776 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 FBXO11Q86XK2 927 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 GPR65Q8IYL9 337 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 SMARCC2Q8TAQ2 1214 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 DDX41Q9UJV9 622 aaKnown RBP8.29□□□□□ -1.08
CBWD1-219ENST00000611457 A0A1W2PQ45 241 aaPredicted RBP8.29□□□□□ -1.08
CBWD1-219ENST00000611457 A0A1W2PQY0 241 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 STXBP3O00186 592 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 USP11P51784 963 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 PURAQ00577 322 aaKnown RBP8.29□□□□□ -1.08
CBWD1-219ENST00000611457 POU5F1BQ06416 359 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 PRKG1Q13976 671 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 PGM5Q15124 567 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 MUM1L1Q5H9M0 696 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 CATIPQ7Z7H3 387 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 AGBL1Q96MI9 1066 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 CTAGE1Q96RT6 745 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 NR2E3Q9Y5X4 410 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 IGSF9BQ9UPX0 1349 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 GOLGA6L3A6NEY3 463 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 TIMP1P01033 207 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 MGAT3Q09327 533 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 CCDC155Q8N6L0 562 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 NEK1Q96PY6 1258 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 SCN5AQ14524 2016 aa8.29□□□□□ -1.08
CBWD1-219ENST00000611457 RARBP10826 455 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 CCND2P30279 289 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 MTFR1Q15390 333 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 PKN1Q16512 942 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 IFNLR1Q8IU57 520 aaPredicted RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 PDCD2LQ9BRP1 358 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 MTG1Q9BT17 334 aaPredicted RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 RNF216Q9NWF9 866 aaPredicted RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 KIAA1549LQ6ZVL6 1849 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 FIBPO43427 364 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 KDM4AO75164 1064 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 RGS20O76081 388 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 ACLYP53396 1101 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 NPY5RQ15761 445 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 CCL14Q16627 93 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 CELF3Q5SZQ8 465 aaKnown RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 TSHZ3Q63HK5 1081 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 CWC27Q6UX04 472 aaKnown RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 FANCBQ8NB91 859 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 BICD2Q8TD16 824 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 CCDC12Q8WUD4 166 aaPredicted RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 PATJQ8NI35 1801 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 KBTBD13C9JR72 458 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 TRDNQ13061 729 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 TOB2Q14106 344 aaPredicted RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 RNF207Q6ZRF8 634 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 APBB2Q92870 758 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 UBAC1Q9BSL1 405 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 RC3H2Q9HBD1 1191 aaKnown RBP8.28□□□□□ -1.08
CBWD1-219ENST00000611457 CCPG1Q9ULG6 757 aa8.28□□□□□ -1.08
CBWD1-219ENST00000611457 ANK1P16157 1881 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms