RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CARSP49589 748 aaKnown RBP22.65■■□□□ 1.22
SSBP3-216ENST00000610401 C8orf74Q6P047 294 aa22.65■■□□□ 1.22
SSBP3-216ENST00000610401 PLEKHG2Q9H7P9 1386 aa22.65■■□□□ 1.22
SSBP3-216ENST00000610401 TDP2O95551 362 aa22.65■■□□□ 1.22
SSBP3-216ENST00000610401 GTF2A1P52655 376 aaPredicted RBP22.65■■□□□ 1.22
SSBP3-216ENST00000610401 CHD4Q14839 1912 aa22.65■■□□□ 1.22
SSBP3-216ENST00000610401 MYMKA6NI61 221 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 TNNI2P48788 182 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 RPS8P62241 208 aaKnown RBP22.64■■□□□ 1.22
SSBP3-216ENST00000610401 SOGA3Q5TF21 947 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 TBC1D9BQ66K14 1250 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 EHBP1Q8NDI1 1231 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 EPB41L5Q9HCM4 733 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 ADAMTSL3P82987 1691 aa22.64■■□□□ 1.22
SSBP3-216ENST00000610401 A0A1W2PQC6 194 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 STXBP3O00186 592 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 EHHADHQ08426 723 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 UBE4AQ14139 1066 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 DDB1Q16531 1140 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 PTF1AQ7RTS3 328 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 CCDC43Q96MW1 224 aaKnown RBP22.64■■□□□ 1.21
SSBP3-216ENST00000610401 TTYH3Q9C0H2 523 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 BCCIPQ9P287 314 aaKnown RBP eCLIP22.64■■□□□ 1.21
SSBP3-216ENST00000610401 ZC3H4Q9UPT8 1303 aaKnown RBP22.64■■□□□ 1.21
SSBP3-216ENST00000610401 GPCPD1Q9NPB8 672 aa22.64■■□□□ 1.21
SSBP3-216ENST00000610401 PAFAH1B1P43034 410 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 MAGEA9P43362 315 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 GUCY1A3Q02108 690 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 FAM184BQ9ULE4 1060 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 F8W031 263 aaPredicted RBP22.63■■□□□ 1.21
SSBP3-216ENST00000610401 TRAF5O00463 557 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 UBE2SQ16763 222 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 CCDC40Q4G0X9 1142 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 KCNK18Q7Z418 384 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 LRRC47Q8N1G4 583 aaKnown RBP22.63■■□□□ 1.21
SSBP3-216ENST00000610401 CALML4Q96GE6 196 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 KRT12Q99456 494 aa22.63■■□□□ 1.21
SSBP3-216ENST00000610401 NPHP3-ACAD11A0A0J9YXS1 232 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 GLI1P08151 1106 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 POLR2FP61218 127 aaKnown RBP22.62■■□□□ 1.21
SSBP3-216ENST00000610401 PICALMQ13492 652 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 HLTFQ14527 1009 aaKnown RBP eCLIP22.62■■□□□ 1.21
SSBP3-216ENST00000610401 PACSIN1Q9BY11 444 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 MKRN1Q9UHC7 482 aaKnown RBP22.62■■□□□ 1.21
SSBP3-216ENST00000610401 EBAG9O00559 213 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 NONOQ15233 471 aaKnown RBP eCLIP22.62■■□□□ 1.211e-6■■■□□ 17.3
SSBP3-216ENST00000610401 MEA1Q16626 185 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 VWA3BQ502W6 1294 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 NBPF5PQ86XG9 351 aaPredicted RBP22.62■■□□□ 1.21
SSBP3-216ENST00000610401 GPATCH11Q8N954 259 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 TRIM58Q8NG06 486 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 PYM1Q9BRP8 204 aaKnown RBP22.62■■□□□ 1.21
SSBP3-216ENST00000610401 BSDC1Q9NW68 430 aaPredicted RBP22.62■■□□□ 1.21
SSBP3-216ENST00000610401 JRKLQ9Y4A0 524 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 ZNF804BA4D1E1 1349 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 BICDL2A1A5D9 508 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 ATP2C2O75185 946 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 RAPGEF1Q13905 1077 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 SV2BQ7L1I2 683 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 MTA3Q9BTC8 594 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 FGFBP2Q9BYJ0 223 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 SH2D4AQ9H788 454 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 FAM169AQ9Y6X4 670 aa22.62■■□□□ 1.21
SSBP3-216ENST00000610401 DDX60Q8IY21 1712 aaKnown RBP22.61■■□□□ 1.21
SSBP3-216ENST00000610401 NDUFAB1O14561 156 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 SLC37A4O43826 429 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 MAATS1Q7Z4T9 603 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 OR2W6PQ8NHA6 318 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 DHTKD1Q96HY7 919 aaPredicted RBP22.61■■□□□ 1.21
SSBP3-216ENST00000610401 BARHL2Q9NY43 387 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 ADAMTS1Q9UHI8 967 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 SEC24CP53992 1094 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 ALS2CR12Q96Q35 445 aa22.61■■□□□ 1.21
SSBP3-216ENST00000610401 ARPP21Q9UBL0 812 aaPredicted RBP22.61■■□□□ 1.21
SSBP3-216ENST00000610401 ORC4O43929 436 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 HSF2BPO75031 334 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 NOP2P46087 812 aaKnown RBP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 CORO7P57737 925 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 TTMPQ5BVD1 217 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 SNX29Q8TEQ0 813 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 ZIM3Q96PE6 472 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 MMTAG2Q9BU76 263 aaKnown RBP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 SEC63Q9UGP8 760 aaKnown RBP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 LDHBP07195 334 aaKnown RBP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 MCM3P25205 808 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 ATP8A2Q9NTI2 1148 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 USP17L5A8MUK1 530 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 H0YHG0 523 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 PALMO75781 387 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 HEXIM1O94992 359 aaKnown RBP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 RNF187Q5TA31 235 aaPredicted RBP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 NEK8Q86SG6 692 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 DDX42Q86XP3 938 aaKnown RBP eCLIP22.6■■□□□ 1.21
SSBP3-216ENST00000610401 TBC1D5Q92609 795 aa22.6■■□□□ 1.21
SSBP3-216ENST00000610401 TUBB4BP68371 445 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 KCNB1Q14721 858 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 HAUS3Q68CZ6 603 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 NUP58Q9BVL2 599 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 FLT1P17948 1338 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms