RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 RTN1Q16799 776 aa19.14■□□□□ 0.65
LINC00240-203ENST00000606878 FBXL16Q8N461 479 aa19.14■□□□□ 0.65
LINC00240-203ENST00000606878 CCDC196A0A1B0GTZ2 297 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 CST5P28325 142 aaPredicted RBP19.13■□□□□ 0.65
LINC00240-203ENST00000606878 HOXA13P31271 388 aaPredicted RBP19.13■□□□□ 0.65
LINC00240-203ENST00000606878 NKX3-2P78367 333 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 DUSP28Q4G0W2 176 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 SCFD2Q8WU76 684 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 BRF1Q92994 677 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 ZSWIM6Q9HCJ5 1215 aa19.13■□□□□ 0.65
LINC00240-203ENST00000606878 GOLGA8AA7E2F4 631 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 ZEB2O60315 1214 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 EIF3JO75822 258 aaKnown RBP19.12■□□□□ 0.65
LINC00240-203ENST00000606878 NR3C2P08235 984 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 EIF2AK2P19525 551 aaKnown RBP19.12■□□□□ 0.65
LINC00240-203ENST00000606878 APOBRQ0VD83 1088 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 CCSAPQ6IQ19 270 aaPredicted RBP19.12■□□□□ 0.65
LINC00240-203ENST00000606878 RUFY3Q7L099 469 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 TLK2Q86UE8 772 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 FCHSD1Q86WN1 690 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 CUL5Q93034 780 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 GLT1D1Q96MS3 346 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 TM6SF1Q9BZW5 370 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 PXMP2Q9NR77 195 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 CYP46A1Q9Y6A2 500 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 MCM3APO60318 1980 aa19.12■□□□□ 0.65
LINC00240-203ENST00000606878 A0A1W2PQ45 241 aaPredicted RBP19.11■□□□□ 0.65
LINC00240-203ENST00000606878 A0A1W2PQY0 241 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 MYADML2A6NDP7 307 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 NKRFO15226 690 aaKnown RBP eCLIP19.11■□□□□ 0.65
LINC00240-203ENST00000606878 ASGR1P07306 291 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 TXNP10599 105 aaKnown RBP19.11■□□□□ 0.65
LINC00240-203ENST00000606878 RTP1P59025 263 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 TTLL4Q14679 1199 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 FSCN1Q16658 493 aaKnown RBP19.11■□□□□ 0.65
LINC00240-203ENST00000606878 C1orf53Q5VUE5 145 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 STARD7Q9NQZ5 370 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 ZMYND8Q9ULU4 1186 aaPredicted RBP19.11■□□□□ 0.65
LINC00240-203ENST00000606878 ATP11BQ9Y2G3 1177 aa19.11■□□□□ 0.65
LINC00240-203ENST00000606878 V9GY48 417 aaPredicted RBP19.11■□□□□ 0.65
LINC00240-203ENST00000606878 ELP1O95163 1332 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 hCG_1642624A0A1W2PR95 340 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 CTAGE5O15320 804 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 METAP2P50579 478 aaKnown RBP eCLIP19.1■□□□□ 0.65
LINC00240-203ENST00000606878 IRX5P78411 483 aaPredicted RBP19.1■□□□□ 0.65
LINC00240-203ENST00000606878 BEX3Q00994 111 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 SNX17Q15036 470 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 TMEM63BQ5T3F8 832 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 SEPT14Q6ZU15 432 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 VSIG10LQ86VR7 867 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 AGXT2Q9BYV1 514 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 PSTPIP2Q9H939 334 aa19.1■□□□□ 0.65
LINC00240-203ENST00000606878 CABYRO75952 493 aa19.09■□□□□ 0.65
LINC00240-203ENST00000606878 MYCLP12524 364 aaPredicted RBP19.09■□□□□ 0.65
LINC00240-203ENST00000606878 ADD1P35611 737 aaKnown RBP19.09■□□□□ 0.65
LINC00240-203ENST00000606878 BRDTQ58F21 947 aaPredicted RBP19.09■□□□□ 0.65
LINC00240-203ENST00000606878 SMARCC2Q8TAQ2 1214 aa19.09■□□□□ 0.65
LINC00240-203ENST00000606878 PDCD2LQ9BRP1 358 aa19.09■□□□□ 0.65
LINC00240-203ENST00000606878 FAM217BQ9NTX9 383 aaPredicted RBP19.09■□□□□ 0.65
LINC00240-203ENST00000606878 PRKAG2Q9UGJ0 569 aa19.09■□□□□ 0.65
LINC00240-203ENST00000606878 PIK3CDO00329 1044 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 SYN1P17600 705 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 CDC27P30260 824 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 TLE2Q04725 743 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 FUT2Q10981 343 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 TRIM60Q495X7 471 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 HEATR3Q7Z4Q2 680 aa19.08■□□□□ 0.64
LINC00240-203ENST00000606878 COLQQ9Y215 455 aaPredicted RBP19.08■□□□□ 0.64
LINC00240-203ENST00000606878 PTGS1P23219 599 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 CCND2P30279 289 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 CPT1AP50416 773 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 EVCP57679 992 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 ANAPC15P60006 121 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 PGM5Q15124 567 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 CCDC62Q6P9F0 684 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 KCNV1Q6PIU1 500 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 USP17L6PQ6QN14 398 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 CXCL17Q6UXB2 119 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 CHRDL2Q6WN34 429 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 OR6J1Q8NGC5 347 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 PDRG1Q9NUG6 133 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 MYH6P13533 1939 aa19.07■□□□□ 0.64
LINC00240-203ENST00000606878 MEIS2O14770 477 aa19.06■□□□□ 0.64
LINC00240-203ENST00000606878 PDIA3P30101 505 aaKnown RBP19.06■□□□□ 0.64
LINC00240-203ENST00000606878 TOX2Q96NM4 488 aa19.06■□□□□ 0.64
LINC00240-203ENST00000606878 UPF3BQ9BZI7 483 aaKnown RBP19.06■□□□□ 0.64
LINC00240-203ENST00000606878 POLR3EQ9NVU0 708 aa19.06■□□□□ 0.64
LINC00240-203ENST00000606878 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
LINC00240-203ENST00000606878 A0A0U1RQG5 324 aaPredicted RBP19.05■□□□□ 0.64
LINC00240-203ENST00000606878 DCDC2CA8MYV0 355 aa19.05■□□□□ 0.64
LINC00240-203ENST00000606878 KPNA6O60684 536 aa19.05■□□□□ 0.64
LINC00240-203ENST00000606878 PQBP1O60828 265 aaKnown RBP19.05■□□□□ 0.64
LINC00240-203ENST00000606878 GH1P01241 217 aa19.05■□□□□ 0.64
LINC00240-203ENST00000606878 LY6KQ17RY6 165 aa19.05■□□□□ 0.64
LINC00240-203ENST00000606878 COPS5Q92905 334 aa19.05■□□□□ 0.64
LINC00240-203ENST00000606878 GPKOWQ92917 476 aaPredicted RBP eCLIP19.05■□□□□ 0.64
LINC00240-203ENST00000606878 LBHD1Q9BQE6 289 aaPredicted RBP19.05■□□□□ 0.64
LINC00240-203ENST00000606878 SEZ6LQ9BYH1 1024 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms