RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 JAK2O60674 1132 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 SNAI1O95863 264 aaPredicted RBP17.88■□□□□ 0.45
CDCA3-211ENST00000603043 CYBAP13498 195 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 MRPL12P52815 198 aaKnown RBP17.88■□□□□ 0.45
CDCA3-211ENST00000603043 ARHGEF16Q5VV41 709 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 AIFM3Q96NN9 605 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 ZMYND12Q9H0C1 365 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 GLT8D2Q9H1C3 349 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 UNC93B1Q9H1C4 597 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 HMX1Q9NP08 348 aaPredicted RBP17.88■□□□□ 0.45
CDCA3-211ENST00000603043 RIC8AQ9NPQ8 531 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 DDX49Q9Y6V7 483 aaKnown RBP17.88■□□□□ 0.45
CDCA3-211ENST00000603043 B4DLN1 442 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 CCL5P13501 91 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 EIF2AK2P19525 551 aaKnown RBP17.88■□□□□ 0.45
CDCA3-211ENST00000603043 UBE2SQ16763 222 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 WASF1Q92558 559 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 RNF208Q9H0X6 261 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 C6orf50Q9HD87 102 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 PXMP2Q9NR77 195 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 NRBP1Q9UHY1 535 aa17.88■□□□□ 0.45
CDCA3-211ENST00000603043 FDPSP14324 419 aaKnown RBP17.87■□□□□ 0.45
CDCA3-211ENST00000603043 PRAMEF19Q5SWL8 479 aa17.87■□□□□ 0.45
CDCA3-211ENST00000603043 TEX2Q8IWB9 1127 aa17.87■□□□□ 0.45
CDCA3-211ENST00000603043 MORC4Q8TE76 937 aa17.87■□□□□ 0.45
CDCA3-211ENST00000603043 SHISA4Q96DD7 197 aa17.87■□□□□ 0.45
CDCA3-211ENST00000603043 ABHD16BQ9H3Z7 469 aa17.87■□□□□ 0.45
CDCA3-211ENST00000603043 EDNRBP24530 442 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 GNA11P29992 359 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 CCND3P30281 292 aaPredicted RBP17.86■□□□□ 0.45
CDCA3-211ENST00000603043 PDE4DQ08499 809 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 TRPV1Q8NER1 839 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDCA3-211ENST00000603043 SPDYE3A6NKU9 549 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 XBP1P17861 261 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 CNGA1P29973 690 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 NLRP5P59047 1200 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 FAM177A1Q8N128 213 aaPredicted RBP17.86■□□□□ 0.45
CDCA3-211ENST00000603043 IWS1Q96ST2 819 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
CDCA3-211ENST00000603043 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 FRMPD3Q5JV73 1810 aa17.86■□□□□ 0.45
CDCA3-211ENST00000603043 ACVR2BQ13705 512 aa17.85■□□□□ 0.45
CDCA3-211ENST00000603043 EEPD1Q7L9B9 569 aa17.85■□□□□ 0.45
CDCA3-211ENST00000603043 ALG1Q9BT22 464 aa17.85■□□□□ 0.45
CDCA3-211ENST00000603043 PAK6Q9NQU5 681 aaPredicted RBP17.85■□□□□ 0.45
CDCA3-211ENST00000603043 NR3C2P08235 984 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
CDCA3-211ENST00000603043 HMGN5P82970 282 aaKnown RBP17.84■□□□□ 0.45
CDCA3-211ENST00000603043 PGM5Q15124 567 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 FBXO16Q8IX29 292 aaPredicted RBP17.84■□□□□ 0.45
CDCA3-211ENST00000603043 REXO1Q8N1G1 1221 aaKnown RBP17.84■□□□□ 0.45
CDCA3-211ENST00000603043 BICD2Q8TD16 824 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 TMEM106CQ9BVX2 250 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 KATNBL1Q9H079 304 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 FRMPD4Q14CM0 1322 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 CCDC85CA6NKD9 419 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 CLK2P49760 499 aaKnown RBP17.84■□□□□ 0.45
CDCA3-211ENST00000603043 VTA1Q9NP79 307 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 PCDHA6Q9UN73 950 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 PCDHA8Q9Y5H6 950 aa17.84■□□□□ 0.45
CDCA3-211ENST00000603043 SEPT4O43236 478 aa17.83■□□□□ 0.44
CDCA3-211ENST00000603043 FOSP01100 380 aaPredicted RBP17.83■□□□□ 0.44
CDCA3-211ENST00000603043 AP3B2Q13367 1082 aa17.83■□□□□ 0.44
CDCA3-211ENST00000603043 STXBP2Q15833 593 aa17.83■□□□□ 0.44
CDCA3-211ENST00000603043 IL31RAQ8NI17 732 aa17.83■□□□□ 0.44
CDCA3-211ENST00000603043 GJB4Q9NTQ9 266 aa17.83■□□□□ 0.44
CDCA3-211ENST00000603043 TMEM260Q9NX78 707 aa17.83■□□□□ 0.44
CDCA3-211ENST00000603043 GJB1P08034 283 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 MYCLP12524 364 aaPredicted RBP17.82■□□□□ 0.44
CDCA3-211ENST00000603043 AKR1A1P14550 325 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 GALNT17Q6IS24 598 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 FAM184AQ8NB25 1140 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 SNX21Q969T3 373 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 DEFB118Q96PH6 123 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 PCDHA4Q9UN74 947 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 K7ELQ4 463 aaPredicted RBP17.82■□□□□ 0.44
CDCA3-211ENST00000603043 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 MSCO60682 206 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 CCND2P30279 289 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 NBR1Q14596 966 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 CCDC144BQ3MJ40 725 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 VSIG10LQ86VR7 867 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 ANO3Q9BYT9 981 aa17.82■□□□□ 0.44
CDCA3-211ENST00000603043 DDX20Q9UHI6 824 aaKnown RBP17.82■□□□□ 0.44
CDCA3-211ENST00000603043 EIF3JO75822 258 aaKnown RBP17.81■□□□□ 0.44
CDCA3-211ENST00000603043 TRIM29Q14134 588 aa17.81■□□□□ 0.44
CDCA3-211ENST00000603043 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
CDCA3-211ENST00000603043 DAGLBQ8NCG7 672 aa17.81■□□□□ 0.44
CDCA3-211ENST00000603043 PDGFCQ9NRA1 345 aa17.81■□□□□ 0.44
CDCA3-211ENST00000603043 FAM184BQ9ULE4 1060 aa17.81■□□□□ 0.44
CDCA3-211ENST00000603043 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.81■□□□□ 0.44
CDCA3-211ENST00000603043 FOSBP53539 338 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms