RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 PBX4Q9BYU1 374 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 CNNM2Q9H8M5 875 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 VAT1LQ9HCJ6 419 aa24.76■■□□□ 1.55
PPFIA3-209ENST00000602783 EYSQ5T1H1 3165 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 MYH6P13533 1939 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 PARP1P09874 1014 aaKnown RBP24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 TXNP10599 105 aaKnown RBP24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 PBX2P40425 430 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 RUFY2Q8WXA3 655 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 UBAC1Q9BSL1 405 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 WNT8AQ9H1J5 351 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 TRMT13Q9NUP7 481 aaKnown RBP24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 CXXC1Q9P0U4 656 aaPredicted RBP24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 ABCB11O95342 1321 aa24.75■■□□□ 1.55
PPFIA3-209ENST00000602783 SUPT20HL2P0C7V6 817 aa24.74■■□□□ 1.55
PPFIA3-209ENST00000602783 QRICH1Q2TAL8 776 aa24.74■■□□□ 1.55
PPFIA3-209ENST00000602783 TAAR1Q96RJ0 339 aa24.74■■□□□ 1.55
PPFIA3-209ENST00000602783 JMJD4Q9H9V9 463 aa24.74■■□□□ 1.55
PPFIA3-209ENST00000602783 CYP2C9P11712 490 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 TTLL4Q14679 1199 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 NBPF20Q3BBV1 942 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 IFIT1BQ5T764 474 aaKnown RBP24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 OTOP2Q7RTS6 562 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 FBXO11Q86XK2 927 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 MCF2L2Q86YR7 1114 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 SYTL5Q8TDW5 730 aaPredicted RBP24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 SCLYQ96I15 445 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 COL25A1Q9BXS0 654 aaPredicted RBP24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 MAF1Q9H063 256 aa24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 MTIF3Q9H2K0 278 aaKnown RBP24.73■■□□□ 1.55
PPFIA3-209ENST00000602783 MYO9BQ13459 2157 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 A6NJR5 290 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 KPNA6O60684 536 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 ARIH2O95376 493 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 FAM47CQ5HY64 1035 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 RPUSD2Q8IZ73 545 aaKnown RBP24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 NSUN6Q8TEA1 469 aaKnown RBP24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 PPP1R13LQ8WUF5 828 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 COL20A1Q9P218 1284 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 MRPL11Q9Y3B7 192 aaKnown RBP24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 PRUNE2Q8WUY3 3088 aa24.72■■□□□ 1.55
PPFIA3-209ENST00000602783 PTH1RQ03431 593 aa24.71■■□□□ 1.55
PPFIA3-209ENST00000602783 SEPT14Q6ZU15 432 aa24.71■■□□□ 1.55
PPFIA3-209ENST00000602783 STAG2Q8N3U4 1231 aa24.71■■□□□ 1.55
PPFIA3-209ENST00000602783 MSRAQ9UJ68 235 aa24.71■■□□□ 1.55
PPFIA3-209ENST00000602783 CCDC62Q6P9F0 684 aa24.7■■□□□ 1.54
PPFIA3-209ENST00000602783 CYB5R4Q7L1T6 521 aa24.7■■□□□ 1.54
PPFIA3-209ENST00000602783 RMDN3Q96TC7 470 aa24.7■■□□□ 1.54
PPFIA3-209ENST00000602783 SGSM2O43147 1006 aa24.69■■□□□ 1.54
PPFIA3-209ENST00000602783 SEC23AQ15436 765 aa24.69■■□□□ 1.54
PPFIA3-209ENST00000602783 RAB30Q15771 203 aa24.69■■□□□ 1.54
PPFIA3-209ENST00000602783 STXBP2Q15833 593 aa24.69■■□□□ 1.54
PPFIA3-209ENST00000602783 IWS1Q96ST2 819 aa24.69■■□□□ 1.54
PPFIA3-209ENST00000602783 SCN10AQ9Y5Y9 1956 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 KLRF2D3W0D1 207 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 CYP21A2P08686 494 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 CHMP4BP1P59074 171 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 TRDNQ13061 729 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 LY6KQ17RY6 165 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 ARHGEF16Q5VV41 709 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 NFRKBQ6P4R8 1299 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 VWCEQ96DN2 955 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 AMNQ9BXJ7 453 aa24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 U3KPZ7 1027 aaPredicted RBP24.68■■□□□ 1.54
PPFIA3-209ENST00000602783 CFBP00751 764 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 GH1P01241 217 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 CHST3Q7LGC8 479 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 AFG1LQ8WV93 481 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 GAS2L1Q99501 681 aaPredicted RBP24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 NKX2-4Q9H2Z4 354 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 PRDM12Q9H4Q4 367 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 SLC4A7Q9Y6M7 1214 aa24.67■■□□□ 1.54
PPFIA3-209ENST00000602783 ZBBXA8MT70 800 aa24.66■■□□□ 1.54
PPFIA3-209ENST00000602783 EIF2AK2P19525 551 aaKnown RBP24.66■■□□□ 1.54
PPFIA3-209ENST00000602783 PTPN11Q06124 597 aaPredicted RBP24.66■■□□□ 1.54
PPFIA3-209ENST00000602783 DEFB128Q7Z7B8 93 aa24.66■■□□□ 1.54
PPFIA3-209ENST00000602783 MAD2L2Q9UI95 211 aa24.66■■□□□ 1.54
PPFIA3-209ENST00000602783 TAF6LQ9Y6J9 622 aa24.66■■□□□ 1.54
PPFIA3-209ENST00000602783 NR3C2P08235 984 aa24.65■■□□□ 1.54
PPFIA3-209ENST00000602783 RETREG2Q8NC44 543 aa24.65■■□□□ 1.54
PPFIA3-209ENST00000602783 SLC28A3Q9HAS3 691 aa24.65■■□□□ 1.54
PPFIA3-209ENST00000602783 YBX2Q9Y2T7 364 aaKnown RBP24.65■■□□□ 1.54
PPFIA3-209ENST00000602783 PALM3A6NDB9 673 aaPredicted RBP24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 ZBTB5O15062 677 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 EIF3JO75822 258 aaKnown RBP24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 PFKMP08237 780 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 MMP3P08254 477 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 RABGGTBP53611 331 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 ARHGAP1Q07960 439 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 USP38Q8NB14 1042 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 MTMR8Q96EF0 704 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 PXMP2Q9NR77 195 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 NOD1Q9Y239 953 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 PCDHA1Q9Y5I3 950 aa24.64■■□□□ 1.54
PPFIA3-209ENST00000602783 OPLAHO14841 1288 aa24.63■■□□□ 1.53
PPFIA3-209ENST00000602783 IFIT3O14879 490 aaKnown RBP24.63■■□□□ 1.53
PPFIA3-209ENST00000602783 PPP1R11O60927 126 aaPredicted RBP24.63■■□□□ 1.53
PPFIA3-209ENST00000602783 HSD17B4P51659 736 aa24.63■■□□□ 1.53
PPFIA3-209ENST00000602783 RALYLQ86SE5 291 aaKnown RBP24.63■■□□□ 1.53
PPFIA3-209ENST00000602783 DDX41Q9UJV9 622 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms