RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 SHANK2Q9UPX8 1470 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 NVLO15381 856 aaKnown RBP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 PTGDRQ13258 359 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 SGO2Q562F6 1265 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 TBC1D22AQ8WUA7 517 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 TRIM11Q96F44 468 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 TPCN1Q9ULQ1 816 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ARHGEF10O15013 1369 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 C2orf54Q08AI8 447 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 SEPT2Q15019 361 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ZC3H18Q86VM9 953 aaKnown RBP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 CCDC127Q96BQ5 260 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ARHGEF18Q6ZSZ5 1173 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ANLNQ9NQW6 1124 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ABCC12Q96J65 1359 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 A0A087WUV0 522 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 NEK8Q86SG6 692 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 GJA10Q969M2 543 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 A0A1W2PQ27 194 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 A0A1W2PQ64 194 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 A0A1W2PQD8 194 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ZAP70P43403 619 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ECEL1O95672 775 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 TMOD1P28289 359 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 PKP1Q13835 747 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 CCHCR1Q8TD31 782 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 CLIC6Q96NY7 704 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 PACSIN2Q9UNF0 486 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 LONP1P36776 959 aaKnown RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 RFX6Q8HWS3 928 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 CUEDC2Q9H467 287 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 EXOC1LA0A1B0GW35 172 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 TTI1O43156 1089 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 MSH2P43246 934 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 MAP7D3Q8IWC1 876 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ST13P4Q8IZP2 240 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 CHMP6Q96FZ7 201 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 FGD4Q96M96 766 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 MYO1FO00160 1098 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 NR1D1P20393 614 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 NNTQ13423 1086 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 SNX1Q13596 522 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 IQCB1Q15051 598 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ANKRD35Q8N283 1001 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 EEF2KMTQ96G04 330 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 TOM1L1O75674 476 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 SLC12A1Q13621 1099 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 AOC3Q16853 763 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 KLHL29Q96CT2 875 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 KRT82Q9NSB4 513 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ZBTB24O43167 697 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 CXCR5P32302 372 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 MICAL3Q7RTP6 2002 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 KDM5DQ9BY66 1539 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ACTR5Q9H9F9 607 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-217ENST00000602723 NRBP1Q9UHY1 535 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 PEG3Q9GZU2 1588 aa10.42□□□□□ -0.74
CSMD1-217ENST00000602723 ABL1P00519 1130 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TMEM191BP0C7N4 346 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TUBB6Q9BUF5 446 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ANGPTL3Q9Y5C1 460 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 PLTPP55058 493 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 POLE2P56282 527 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 HP1BP3Q5SSJ5 553 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TRMT10CQ7L0Y3 403 aaKnown RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 FANCBQ8NB91 859 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 SLC17A8Q8NDX2 589 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 RFX1P22670 979 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 XKR9Q5GH70 373 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TDRD7Q8NHU6 1098 aaKnown RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TESK2Q96S53 571 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 FMO2Q99518 471 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 MAP3K19Q56UN5 1328 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 MFSD14BQ5SR56 506 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 SPOUT1Q5T280 376 aaKnown RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 MCUQ8NE86 351 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TRAPPC8Q9Y2L5 1435 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 DDAH1O94760 285 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 POLGP54098 1239 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ANKRD13CQ8N6S4 541 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ADPGKQ9BRR6 497 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 YY1AP1Q9H869 796 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 RTEL1Q9NZ71 1219 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 MAPK4P31152 587 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 DPP8Q6V1X1 898 aaPredicted RBP10.41□□□□□ -0.74
CSMD1-217ENST00000602723 CLIC4Q9Y696 253 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 CCDC151A5D8V7 595 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ACTN1P12814 892 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 SLCO1A2P46721 670 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 KIF22Q14807 665 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TBK1Q9UHD2 729 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 SYNMO15061 1565 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms