RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 TNKSO95271 1327 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 RAD50Q92878 1312 aa15.4■□□□□ 0.06
RPS28-204ENST00000602140 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 LAMA4Q16363 1823 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 TXNP10599 105 aaKnown RBP15.39■□□□□ 0.05
RPS28-204ENST00000602140 RAB30Q15771 203 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 NBPF20Q3BBV1 942 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 FAM47CQ5HY64 1035 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 RPUSD2Q8IZ73 545 aaKnown RBP15.39■□□□□ 0.05
RPS28-204ENST00000602140 ENAHQ8N8S7 591 aaPredicted RBP15.39■□□□□ 0.05
RPS28-204ENST00000602140 PPP1R13LQ8WUF5 828 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
RPS28-204ENST00000602140 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 ABCB11O95342 1321 aa15.39■□□□□ 0.05
RPS28-204ENST00000602140 A6NJR5 290 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 DHX16O60231 1041 aaKnown RBP15.38■□□□□ 0.05
RPS28-204ENST00000602140 ARIH2O95376 493 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 USP38Q8NB14 1042 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 VWCEQ96DN2 955 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 TAAR1Q96RJ0 339 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 KRT23Q9C075 422 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 NKX2-4Q9H2Z4 354 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 VAT1LQ9HCJ6 419 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 CTNNA3Q9UI47 895 aa15.38■□□□□ 0.05
RPS28-204ENST00000602140 KPNA6O60684 536 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 PARP1P09874 1014 aaKnown RBP15.37■□□□□ 0.05
RPS28-204ENST00000602140 QRICH1Q2TAL8 776 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 SYTL5Q8TDW5 730 aaPredicted RBP15.37■□□□□ 0.05
RPS28-204ENST00000602140 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 SLC28A3Q9HAS3 691 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 COL20A1Q9P218 1284 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 YBX2Q9Y2T7 364 aaKnown RBP15.37■□□□□ 0.05
RPS28-204ENST00000602140 SLC4A7Q9Y6M7 1214 aa15.37■□□□□ 0.05
RPS28-204ENST00000602140 ZBBXA8MT70 800 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 RABGGTBP53611 331 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 CHMP4BP1P59074 171 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 CCDC62Q6P9F0 684 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 SEPT14Q6ZU15 432 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 DEFB128Q7Z7B8 93 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 MCF2L2Q86YR7 1114 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 NSUN6Q8TEA1 469 aaKnown RBP15.36■□□□□ 0.05
RPS28-204ENST00000602140 PPM1EQ8WY54 764 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 RMDN3Q96TC7 470 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 MAF1Q9H063 256 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 IL25Q9H293 177 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 CNNM2Q9H8M5 875 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
RPS28-204ENST00000602140 MRPL11Q9Y3B7 192 aaKnown RBP15.36■□□□□ 0.05
RPS28-204ENST00000602140 SPTBN5Q9NRC6 3674 aaKnown RBP15.35■□□□□ 0.05
RPS28-204ENST00000602140 PFKMP08237 780 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 STXBP2Q15833 593 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 LY6KQ17RY6 165 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 IFIT1BQ5T764 474 aaKnown RBP15.35■□□□□ 0.05
RPS28-204ENST00000602140 STAG2Q8N3U4 1231 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 AFG1LQ8WV93 481 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 IWS1Q96ST2 819 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
RPS28-204ENST00000602140 CFBP00751 764 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 GH1P01241 217 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 MYOGP15173 224 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 ATP2A2P16615 1042 aaKnown RBP15.34■□□□□ 0.05
RPS28-204ENST00000602140 EIF2AK2P19525 551 aaKnown RBP15.34■□□□□ 0.05
RPS28-204ENST00000602140 IGFBP4P22692 258 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 PTPN11Q06124 597 aaPredicted RBP15.34■□□□□ 0.05
RPS28-204ENST00000602140 ADGRE1Q14246 886 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 ARHGEF16Q5VV41 709 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 PRDM6Q9NQX0 595 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 NOD1Q9Y239 953 aa15.34■□□□□ 0.05
RPS28-204ENST00000602140 GBF1Q92538 1859 aa15.33■□□□□ 0.05
RPS28-204ENST00000602140 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 MMP3P08254 477 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 IQCF3P0C7M6 154 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 PDE4AP27815 886 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 ARHGAP1Q07960 439 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 SEC23AQ15436 765 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 PPP2R2DQ66LE6 453 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 CYB5R4Q7L1T6 521 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 RETREG2Q8NC44 543 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 SYMPKQ92797 1274 aaKnown RBP15.33■□□□□ 0.04
RPS28-204ENST00000602140 CHD7Q9P2D1 2997 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
RPS28-204ENST00000602140 KLRF2D3W0D1 207 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 NR3C2P08235 984 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 ACTN1P12814 892 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 GSPT1P15170 499 aaKnown RBP15.32■□□□□ 0.04
RPS28-204ENST00000602140 RFC2P35250 354 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 BFSP2Q13515 415 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
RPS28-204ENST00000602140 PTGISQ16647 500 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 TTC22Q5TAA0 569 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
RPS28-204ENST00000602140 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPS28-204ENST00000602140 PXMP2Q9NR77 195 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms