RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 DUSP28Q4G0W2 176 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 SYDE2Q5VT97 1194 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 RNF207Q6ZRF8 634 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 RASGRP2Q7LDG7 609 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 FAM133AQ8N9E0 248 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 ANKS1AQ92625 1134 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 HLA-CQ95604 372 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 FGD4Q96M96 766 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
VRK3-226ENST00000602029 SLC9A7Q96T83 725 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 SEZ6LQ9BYH1 1024 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 WNT8AQ9H1J5 351 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 CYP39A1Q9NYL5 469 aa6.1□□□□□ -1.43
VRK3-226ENST00000602029 BAZ2AQ9UIF9 1905 aaKnown RBP6.09□□□□□ -1.43
VRK3-226ENST00000602029 BAHCC1Q9P281 2608 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 IGKV6D-41A0A0C4DH26 115 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 TRIM6-TRIM34B2RNG4 842 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 NFIBO00712 420 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 SORBS3O60504 671 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 ICAM1P05362 532 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 RFC2P35250 354 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 HAND2P61296 217 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 PTGISQ16647 500 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 CSPP1Q1MSJ5 1256 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 TMEM63BQ5T3F8 832 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 C20orf194Q5TEA3 1177 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 RASIP1Q5U651 963 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 KRT40Q6A162 431 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 TTBK2Q6IQ55 1244 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 SLC30A10Q6XR72 485 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 SEPT14Q6ZU15 432 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 DHX37Q8IY37 1157 aaKnown RBP6.09□□□□□ -1.43
VRK3-226ENST00000602029 C7orf31Q8N865 590 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 SCFD2Q8WU76 684 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 DCAF4Q8WV16 495 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 MKL1Q969V6 931 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 ALG1Q9BT22 464 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 CD320Q9NPF0 282 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 INCENPQ9NQS7 918 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 GNEQ9Y223 722 aaKnown RBP6.09□□□□□ -1.43
VRK3-226ENST00000602029 MYO15AQ9UKN7 3530 aa6.09□□□□□ -1.43
VRK3-226ENST00000602029 PTPRZ1P23471 2315 aaPredicted RBP6.09□□□□□ -1.43
VRK3-226ENST00000602029 COL11A1P12107 1806 aaPredicted RBP6.09□□□□□ -1.44
VRK3-226ENST00000602029 DMDP11532 3685 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 ZNF536O15090 1300 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 GRIN2DO15399 1336 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 ZNFX1Q9P2E3 1918 aaKnown RBP6.08□□□□□ -1.44
VRK3-226ENST00000602029 NKRFO15226 690 aaKnown RBP eCLIP6.08□□□□□ -1.44
VRK3-226ENST00000602029 CTAGE5O15320 804 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 KPNA6O60684 536 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 CSPG5O95196 566 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 TOP1P11387 765 aaKnown RBP6.08□□□□□ -1.44
VRK3-226ENST00000602029 MX1P20591 662 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 PURAQ00577 322 aaKnown RBP6.08□□□□□ -1.44
VRK3-226ENST00000602029 TAPT1Q6NXT6 567 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 TMCO2Q7Z6W1 182 aaPredicted RBP6.08□□□□□ -1.44
VRK3-226ENST00000602029 HERC6Q8IVU3 1022 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 SLC43A3Q8NBI5 491 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 EXOC6Q8TAG9 804 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 GDPD5Q8WTR4 605 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 COPS5Q92905 334 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 BACH2Q9BYV9 841 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 KATNBL1Q9H079 304 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 PNMA2Q9UL42 364 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 COG5Q9UP83 839 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 Q9Y3F1 56 aa6.08□□□□□ -1.44
VRK3-226ENST00000602029 PLIN4Q96Q06 1357 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 PLXNA3P51805 1871 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 TTC41PQ6P2S7 1318 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 GH1P01241 217 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 IQCF3P0C7M6 154 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 GOLGA8HP0CJ92 632 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 CASTP20810 708 aaKnown RBP6.07□□□□□ -1.44
VRK3-226ENST00000602029 KCNA5P22460 613 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 RPS6P62753 249 aaKnown RBP6.07□□□□□ -1.44
VRK3-226ENST00000602029 TAP1Q03518 808 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 GRB10Q13322 594 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 ZMYM1Q5SVZ6 1142 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 ANKRD45Q5TZF3 282 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 ARHGEF16Q5VV41 709 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 NFRKBQ6P4R8 1299 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 MFSD6Q6ZSS7 791 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 LRRC8DQ7L1W4 858 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.07□□□□□ -1.44
VRK3-226ENST00000602029 MYOCDQ8IZQ8 938 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 PHOSPHO2Q8TCD6 241 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 AFG1LQ8WV93 481 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 RILPL2Q969X0 211 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 ZKSCAN3Q9BRR0 538 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 RANBP17Q9H2T7 1088 aaKnown RBP6.07□□□□□ -1.44
VRK3-226ENST00000602029 KAT14Q9H8E8 782 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 VAT1LQ9HCJ6 419 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 IL17RBQ9NRM6 502 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 MTCH2Q9Y6C9 303 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 MRVI1Q9Y6F6 885 aa6.07□□□□□ -1.44
VRK3-226ENST00000602029 KMT2BQ9UMN6 2715 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms