RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
ZNF548-211ENST00000600927 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 PPP6R2O75170 966 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-211ENST00000600927 CYBAP13498 195 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 TRAPPC10P48553 1259 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-211ENST00000600927 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-211ENST00000600927 DIS3L2Q8IYB7 885 aaKnown RBP13.18□□□□□ -0.3
ZNF548-211ENST00000600927 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 DAGLBQ8NCG7 672 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 DEFB118Q96PH6 123 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 MMP19Q99542 508 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-211ENST00000600927 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
ZNF548-211ENST00000600927 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 CCND3P30281 292 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 KRT2P35908 639 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 KCTD2Q14681 263 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 CCDC183Q5T5S1 534 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 LHX8Q68G74 356 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 DPP9Q86TI2 863 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 TRPV1Q8NER1 839 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 CHAMP1Q96JM3 812 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 FGD4Q96M96 766 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
ZNF548-211ENST00000600927 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 OGDHLQ9ULD0 1010 aa13.17□□□□□ -0.3
ZNF548-211ENST00000600927 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 SPTLC2O15270 562 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 PPFIA3O75145 1194 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 ICAM1P05362 532 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 PGK2P07205 417 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 CYP2C19P33261 490 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 SLC16A2P36021 539 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
ZNF548-211ENST00000600927 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 BARHL2Q9NY43 387 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
ZNF548-211ENST00000600927 CYTH3O43739 400 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 GNA11P29992 359 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 NLRP5P59047 1200 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 TRAF1Q13077 416 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-211ENST00000600927 STK38Q15208 465 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 ZSCAN23Q3MJ62 389 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-211ENST00000600927 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
ZNF548-211ENST00000600927 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 ACAD9Q9H845 621 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
ZNF548-211ENST00000600927 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 NOL7Q9UMY1 257 aaKnown RBP13.15□□□□□ -0.3
ZNF548-211ENST00000600927 LRRC37A2A6NM11 1700 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 LCTP09848 1927 aa13.15□□□□□ -0.3
ZNF548-211ENST00000600927 ZNFX1Q9P2E3 1918 aaKnown RBP13.15□□□□□ -0.3
ZNF548-211ENST00000600927 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 CTAGE5O15320 804 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 FARP2O94887 1054 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-211ENST00000600927 FOSBP53539 338 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 SNAP25P60880 206 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 PTPAQ15257 358 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
ZNF548-211ENST00000600927 NPY5RQ15761 445 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms