RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 IWS1Q96ST2 819 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 PTCH2Q9Y6C5 1203 aa19.13■□□□□ 0.65
USHBP1-210ENST00000600286 H3BQV1 296 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 OPLAHO14841 1288 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 AP3B2Q13367 1082 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 GNL2Q13823 731 aaKnown RBP19.12■□□□□ 0.65
USHBP1-210ENST00000600286 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 NPLOC4Q8TAT6 608 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 AIFM3Q96NN9 605 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 TINF2Q9BSI4 451 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 PCDHA4Q9UN74 947 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 CNPY2Q9Y2B0 182 aa19.12■□□□□ 0.65
USHBP1-210ENST00000600286 MEIS2O14770 477 aa19.11■□□□□ 0.65
USHBP1-210ENST00000600286 HMGCRP04035 888 aa19.11■□□□□ 0.65
USHBP1-210ENST00000600286 PDE4DQ08499 809 aa19.11■□□□□ 0.65
USHBP1-210ENST00000600286 TYW1BQ6NUM6 668 aa19.11■□□□□ 0.65
USHBP1-210ENST00000600286 BLIDQ8IZY5 108 aa19.11■□□□□ 0.65
USHBP1-210ENST00000600286 TAAR1Q96RJ0 339 aa19.11■□□□□ 0.65
USHBP1-210ENST00000600286 MYH6P13533 1939 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 SYNGAP1Q96PV0 1343 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 SOWAHBA6NEL2 793 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 DTNBO60941 627 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
USHBP1-210ENST00000600286 KRT2P35908 639 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 ALDH5A1P51649 535 aaPredicted RBP19.1■□□□□ 0.65
USHBP1-210ENST00000600286 FOSBP53539 338 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 STXBP2Q15833 593 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 UBE2SQ16763 222 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 LARP1BQ659C4 914 aaKnown RBP19.1■□□□□ 0.65
USHBP1-210ENST00000600286 DAGLBQ8NCG7 672 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 PHF20Q9BVI0 1012 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 PCDHA6Q9UN73 950 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 KCNJ14Q9UNX9 436 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 PCDHA8Q9Y5H6 950 aa19.1■□□□□ 0.65
USHBP1-210ENST00000600286 POTEFA5A3E0 1075 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 ELNP15502 786 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 EIF2AK2P19525 551 aaKnown RBP19.09■□□□□ 0.65
USHBP1-210ENST00000600286 CCND2P30279 289 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 JAKMIP3Q5VZ66 844 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 KRT40Q6A162 431 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 XRRA1Q6P2D8 792 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 MAMDC4Q6UXC1 1216 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 PXMP2Q9NR77 195 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 NRBP1Q9UHY1 535 aa19.09■□□□□ 0.65
USHBP1-210ENST00000600286 DOCK3Q8IZD9 2030 aa19.08■□□□□ 0.65
USHBP1-210ENST00000600286 CCDC194A0A1B0GVG4 234 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 MMP1P03956 469 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 MYCLP12524 364 aaPredicted RBP19.08■□□□□ 0.64
USHBP1-210ENST00000600286 CCL14Q16627 93 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 ARMCX2Q7L311 632 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 KRT25Q7Z3Z0 450 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 FBXO18Q8NFZ0 1043 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 ZNF333Q96JL9 665 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 ABHD16BQ9H3Z7 469 aa19.08■□□□□ 0.64
USHBP1-210ENST00000600286 EIF3JO75822 258 aaKnown RBP19.07■□□□□ 0.64
USHBP1-210ENST00000600286 STAM2O75886 525 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 NR3C2P08235 984 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 CYP2C19P33261 490 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 ZNF76P36508 570 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 TRIB2Q92519 343 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 PURBQ96QR8 312 aaKnown RBP19.07■□□□□ 0.64
USHBP1-210ENST00000600286 PDCD2LQ9BRP1 358 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 ANO3Q9BYT9 981 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.07■□□□□ 0.64
USHBP1-210ENST00000600286 COL20A1Q9P218 1284 aa19.07■□□□□ 0.64
USHBP1-210ENST00000600286 CLK2P49760 499 aaKnown RBP19.06■□□□□ 0.64
USHBP1-210ENST00000600286 GUCY1B3Q02153 619 aa19.06■□□□□ 0.64
USHBP1-210ENST00000600286 PGM5Q15124 567 aa19.06■□□□□ 0.64
USHBP1-210ENST00000600286 DIS3L2Q8IYB7 885 aaKnown RBP19.06■□□□□ 0.64
USHBP1-210ENST00000600286 VTA1Q9NP79 307 aa19.06■□□□□ 0.64
USHBP1-210ENST00000600286 FLRT1Q9NZU1 646 aa19.06■□□□□ 0.64
USHBP1-210ENST00000600286 PLXNB2O15031 1838 aa19.06■□□□□ 0.64
USHBP1-210ENST00000600286 ZNF236Q9UL36 1845 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 INHAP05111 366 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 CNGA1P29973 690 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 ACVR2BQ13705 512 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 NONOQ15233 471 aaKnown RBP eCLIP19.05■□□□□ 0.64
USHBP1-210ENST00000600286 GNPTABQ3T906 1256 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 MCTP1Q6DN14 999 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 NLRX1Q86UT6 975 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 VSIG10LQ86VR7 867 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 MORC4Q8TE76 937 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 SH3TC2Q8TF17 1288 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 HMX1Q9NP08 348 aaPredicted RBP19.05■□□□□ 0.64
USHBP1-210ENST00000600286 GJB4Q9NTQ9 266 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 TMEM260Q9NX78 707 aa19.05■□□□□ 0.64
USHBP1-210ENST00000600286 ZHX1Q9UKY1 873 aaPredicted RBP19.05■□□□□ 0.64
USHBP1-210ENST00000600286 SLC34A2O95436 690 aa19.04■□□□□ 0.64
USHBP1-210ENST00000600286 PRKAR2AP13861 404 aaKnown RBP19.04■□□□□ 0.64
USHBP1-210ENST00000600286 EDNRBP24530 442 aa19.04■□□□□ 0.64
USHBP1-210ENST00000600286 CACNB2Q08289 660 aaPredicted RBP19.04■□□□□ 0.64
USHBP1-210ENST00000600286 PCNX4Q63HM2 1172 aa19.04■□□□□ 0.64
USHBP1-210ENST00000600286 KCNV1Q6PIU1 500 aa19.04■□□□□ 0.64
USHBP1-210ENST00000600286 FGD4Q96M96 766 aa19.04■□□□□ 0.64
USHBP1-210ENST00000600286 NAP1L4Q99733 375 aaKnown RBP19.04■□□□□ 0.64
USHBP1-210ENST00000600286 FOXP1Q9H334 677 aaPredicted RBP19.04■□□□□ 0.64
USHBP1-210ENST00000600286 FAM184BQ9ULE4 1060 aa19.04■□□□□ 0.64
USHBP1-210ENST00000600286 SMCHD1A6NHR9 2005 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms