RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PXMP2Q9NR77 195 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 SH2B1Q9NRF2 756 aaPredicted RBP15.82■□□□□ 0.12
VRK3-219ENST00000600137 ADD3Q9UEY8 706 aaKnown RBP15.82■□□□□ 0.12
VRK3-219ENST00000600137 NRBP1Q9UHY1 535 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 FRMPD4Q14CM0 1322 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 POTEFA5A3E0 1075 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 GJB1P08034 283 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 ACVR2BQ13705 512 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 UBE2SQ16763 222 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 TMEM63BQ5T3F8 832 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 CPLX2Q6PUV4 134 aaKnown RBP15.81■□□□□ 0.12
VRK3-219ENST00000600137 TRIM22Q8IYM9 498 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 IL31RAQ8NI17 732 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 NSUN6Q8TEA1 469 aaKnown RBP15.81■□□□□ 0.12
VRK3-219ENST00000600137 PDCD2LQ9BRP1 358 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.81■□□□□ 0.12
VRK3-219ENST00000600137 ABHD16BQ9H3Z7 469 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 HMX1Q9NP08 348 aaPredicted RBP15.81■□□□□ 0.12
VRK3-219ENST00000600137 SH3GLB2Q9NR46 395 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 GJB4Q9NTQ9 266 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 VPS54Q9P1Q0 977 aa15.81■□□□□ 0.12
VRK3-219ENST00000600137 ORC3Q9UBD5 711 aaPredicted RBP15.81■□□□□ 0.12
VRK3-219ENST00000600137 RBM47A0AV96 593 aaKnown RBP15.8■□□□□ 0.12
VRK3-219ENST00000600137 M0R2N6 131 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 ADCY6O43306 1168 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 CDKL5O76039 1030 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 RGS20O76081 388 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 NR3C2P08235 984 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
VRK3-219ENST00000600137 VSIG10LQ86VR7 867 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 FCHSD1Q86WN1 690 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 TEX2Q8IWB9 1127 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 IWS1Q96ST2 819 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 LLPHQ9BRT6 129 aaKnown RBP15.8■□□□□ 0.12
VRK3-219ENST00000600137 RNF208Q9H0X6 261 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 PDGFCQ9NRA1 345 aa15.8■□□□□ 0.12
VRK3-219ENST00000600137 SEPT4O43236 478 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 EDIL3O43854 480 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 EIF2AK2P19525 551 aaKnown RBP15.79■□□□□ 0.12
VRK3-219ENST00000600137 MCM2P49736 904 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 MRPL12P52815 198 aaKnown RBP15.79■□□□□ 0.12
VRK3-219ENST00000600137 MRPS9P82933 396 aaKnown RBP15.79■□□□□ 0.12
VRK3-219ENST00000600137 PGM5Q15124 567 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 CRYGNQ8WXF5 182 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 CUL5Q93034 780 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 CRISPLD2Q9H0B8 497 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 TMEM260Q9NX78 707 aa15.79■□□□□ 0.12
VRK3-219ENST00000600137 KIAA1217Q5T5P2 1943 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 SGPL1O95470 568 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 GJA8P48165 433 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
VRK3-219ENST00000600137 ADCY7P51828 1080 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 CUL4AQ13619 759 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 ARHGEF16Q5VV41 709 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 EEPD1Q7L9B9 569 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 FBXO16Q8IX29 292 aaPredicted RBP15.78■□□□□ 0.12
VRK3-219ENST00000600137 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
VRK3-219ENST00000600137 DEFB118Q96PH6 123 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 PHF20Q9BVI0 1012 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 PCDHA6Q9UN73 950 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 CNPY2Q9Y2B0 182 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 PCDHA8Q9Y5H6 950 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 FRMPD3Q5JV73 1810 aa15.78■□□□□ 0.12
VRK3-219ENST00000600137 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.77■□□□□ 0.12
VRK3-219ENST00000600137 CCDC85CA6NKD9 419 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 PTGS1P23219 599 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 CCDC144BQ3MJ40 725 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
VRK3-219ENST00000600137 SNX21Q969T3 373 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 ZFP91Q96JP5 570 aaPredicted RBP15.77■□□□□ 0.12
VRK3-219ENST00000600137 PGBD1Q96JS3 809 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 ALG1Q9BT22 464 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 DDX20Q9UHI6 824 aaKnown RBP15.77■□□□□ 0.12
VRK3-219ENST00000600137 OGDHLQ9ULD0 1010 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 KCNJ14Q9UNX9 436 aa15.77■□□□□ 0.12
VRK3-219ENST00000600137 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
VRK3-219ENST00000600137 EN2P19622 333 aaPredicted RBP15.76■□□□□ 0.11
VRK3-219ENST00000600137 CNGA1P29973 690 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 ADCYAP1R1P41586 468 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 PDE4DQ08499 809 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 STXBP2Q15833 593 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 JAKMIP3Q5VZ66 844 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 ANO1Q5XXA6 986 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 CCDC62Q6P9F0 684 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 DAGLBQ8NCG7 672 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 RASGRP4Q8TDF6 673 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 CCDC12Q8WUD4 166 aaPredicted RBP15.76■□□□□ 0.11
VRK3-219ENST00000600137 LENG1Q96BZ8 264 aaPredicted RBP15.76■□□□□ 0.11
VRK3-219ENST00000600137 GLT8D2Q9H1C3 349 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 C6orf50Q9HD87 102 aa15.76■□□□□ 0.11
VRK3-219ENST00000600137 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
VRK3-219ENST00000600137 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
VRK3-219ENST00000600137 MYH7BA7E2Y1 1941 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 CTAGE5O15320 804 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 ARIH2O95376 493 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 FOSP01100 380 aaPredicted RBP15.75■□□□□ 0.11
VRK3-219ENST00000600137 AKR1A1P14550 325 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 SMPD1P17405 629 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 GNA11P29992 359 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms