RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 HERC6Q8IVU3 1022 aa19.38■□□□□ 0.69
SHKBP1-215ENST00000597649 PHOSPHO2Q8TCD6 241 aa19.38■□□□□ 0.69
SHKBP1-215ENST00000597649 ARNTL2Q8WYA1 636 aa19.38■□□□□ 0.69
SHKBP1-215ENST00000597649 CTAGE1Q96RT6 745 aa19.38■□□□□ 0.69
SHKBP1-215ENST00000597649 SALL3Q9BXA9 1300 aa19.38■□□□□ 0.69
SHKBP1-215ENST00000597649 SCN10AQ9Y5Y9 1956 aa19.38■□□□□ 0.69
SHKBP1-215ENST00000597649 PITPNM1O00562 1244 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 ARIH2O95376 493 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 ACTN1P12814 892 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 RFC2P35250 354 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 PLA2G5P39877 138 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 SLC9A7Q96T83 725 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 FTOQ9C0B1 505 aaKnown RBP eCLIP19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 BRWD1Q9NSI6 2320 aa19.37■□□□□ 0.69
SHKBP1-215ENST00000597649 GTPBP6O43824 516 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 TLL1O43897 1013 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 FGAP02671 866 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 PDHBP11177 359 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 MX1P20591 662 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 PDE4DQ08499 809 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 HDAC1Q13547 482 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 PPP2R5BQ15173 497 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 AAK1Q2M2I8 961 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 RRP12Q5JTH9 1297 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 RETREG2Q8NC44 543 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 EPHX3Q9H6B9 360 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 TCP11L1Q9NUJ3 509 aa19.36■□□□□ 0.69
SHKBP1-215ENST00000597649 NKRFO15226 690 aaKnown RBP eCLIP19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 KPNA6O60684 536 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 LPXNO60711 386 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 TXNP10599 105 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 GRB10Q13322 594 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 TMCO2Q7Z6W1 182 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 SCFD2Q8WU76 684 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 TBC1D5Q92609 795 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 C1QTNF1Q9BXJ1 281 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 TOMM22Q9NS69 142 aa19.35■□□□□ 0.69
SHKBP1-215ENST00000597649 LCHNA4D1U4 455 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 PTPN11Q06124 597 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 ZNF543Q08ER8 600 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 BRDTQ58F21 947 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 ERICH6BQ5W0A0 696 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 CCDC62Q6P9F0 684 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 DNERQ8NFT8 737 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 COG5Q9UP83 839 aa19.34■□□□□ 0.69
SHKBP1-215ENST00000597649 SNHG28P0DPA3 235 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 CHMP4BP1P59074 171 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 BFSP2Q13515 415 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 TCTN1Q2MV58 587 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 GDF6Q6KF10 455 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 AFG1LQ8WV93 481 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 DHX38Q92620 1227 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 KAT2BQ92831 832 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 KHSRPQ92945 711 aaKnown RBP eCLIP19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 FAM122AQ96E09 287 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 CPVLQ9H3G5 476 aa19.33■□□□□ 0.68
SHKBP1-215ENST00000597649 WDR19Q8NEZ3 1342 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 RAD50Q92878 1312 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 KIF28PB7ZC32 967 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 PTGISQ16647 500 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 LY6KQ17RY6 165 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 LRFN3Q9BTN0 628 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 HELLSQ9NRZ9 838 aa19.32■□□□□ 0.68
SHKBP1-215ENST00000597649 A0A0D9SFI3 127 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 BAIAP3O94812 1187 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 HSPD1P10809 573 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 HAND2P61296 217 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 WDR5P61964 334 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 ZNF589Q86UQ0 364 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 HLA-CQ95604 372 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 UBA5Q9GZZ9 404 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 NOD1Q9Y239 953 aa19.31■□□□□ 0.68
SHKBP1-215ENST00000597649 TRIP12Q14669 1992 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 IGHDP01880 384 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 GOLGA8HP0CJ92 632 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 DEFB103AP81534 67 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 ARHGAP1Q07960 439 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 USH1GQ495M9 461 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 MCMDC2Q4G0Z9 681 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 SESTD1Q86VW0 696 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 TTC14Q96N46 770 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 TAAR1Q96RJ0 339 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 COL20A1Q9P218 1284 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 PNMA2Q9UL42 364 aa19.3■□□□□ 0.68
SHKBP1-215ENST00000597649 NBNO60934 754 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 MMP3P08254 477 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 SEPT14Q6ZU15 432 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 TBC1D10CQ8IV04 446 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 CAGE1Q8TC20 777 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 SYTL5Q8TDW5 730 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 AFAP1L1Q8TED9 768 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 MPHOSPH6Q99547 160 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 CD320Q9NPF0 282 aa19.29■□□□□ 0.68
SHKBP1-215ENST00000597649 CXCL10P02778 98 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms