RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 HOXA13P31271 388 aaPredicted RBP18.94■□□□□ 0.62
CHERP-206ENST00000597261 PDE4DQ08499 809 aa18.94■□□□□ 0.62
CHERP-206ENST00000597261 ARHGEF16Q5VV41 709 aa18.94■□□□□ 0.62
CHERP-206ENST00000597261 PXMP2Q9NR77 195 aa18.94■□□□□ 0.62
CHERP-206ENST00000597261 hCG_1642624A0A1W2PR95 340 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 KBTBD13C9JR72 458 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 NR3C2P08235 984 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 METAP2P50579 478 aaKnown RBP eCLIP18.93■□□□□ 0.629e-7■■□□□ 14.5
CHERP-206ENST00000597261 STXBP2Q15833 593 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 DUSP28Q4G0W2 176 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 TMEM63BQ5T3F8 832 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 PRPF38BQ5VTL8 546 aaKnown RBP18.93■□□□□ 0.62
CHERP-206ENST00000597261 VSIG10LQ86VR7 867 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 WDR11Q9BZH6 1224 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 UPF3BQ9BZI7 483 aaKnown RBP18.93■□□□□ 0.62
CHERP-206ENST00000597261 PDRG1Q9NUG6 133 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 NR2E3Q9Y5X4 410 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 SYNRGQ9UMZ2 1314 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 NID2Q14112 1375 aa18.93■□□□□ 0.62
CHERP-206ENST00000597261 MEIS2O14770 477 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 EVI5O60447 810 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 EIF3JO75822 258 aaKnown RBP18.92■□□□□ 0.62
CHERP-206ENST00000597261 KCNA10Q16322 511 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 LRRC26Q2I0M4 334 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 C8orf34Q49A92 452 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 SLC39A5Q6ZMH5 540 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 ZNF274Q96GC6 653 aaPredicted RBP18.92■□□□□ 0.62
CHERP-206ENST00000597261 PDCD2LQ9BRP1 358 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 SPC25Q9HBM1 224 aa18.92■□□□□ 0.62
CHERP-206ENST00000597261 MYADML2A6NDP7 307 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 DYNC1LI2O43237 492 aaPredicted RBP18.91■□□□□ 0.62
CHERP-206ENST00000597261 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
CHERP-206ENST00000597261 IRX5P78411 483 aaPredicted RBP18.91■□□□□ 0.62
CHERP-206ENST00000597261 NTRK3Q16288 839 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 GNASQ5JWF2 1037 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 C1orf53Q5VUE5 145 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 CCDC62Q6P9F0 684 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 NOL8Q76FK4 1167 aaKnown RBP18.91■□□□□ 0.62
CHERP-206ENST00000597261 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
CHERP-206ENST00000597261 CNTNAP5Q8WYK1 1306 aa18.91■□□□□ 0.62
CHERP-206ENST00000597261 MOXD2PA6NHM9 499 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 H0YGN5 161 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
CHERP-206ENST00000597261 EIF2AK2P19525 551 aaKnown RBP18.9■□□□□ 0.62
CHERP-206ENST00000597261 ACLYP53396 1101 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 SNX17Q15036 470 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 USP17L6PQ6QN14 398 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 FCHSD1Q86WN1 690 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 TEX2Q8IWB9 1127 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 PCSK9Q8NBP7 692 aaKnown RBP18.9■□□□□ 0.62
CHERP-206ENST00000597261 SCFD2Q8WU76 684 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 AP5M1Q9H0R1 490 aa18.9■□□□□ 0.62
CHERP-206ENST00000597261 CEP290O15078 2479 aa18.89■□□□□ 0.61
CHERP-206ENST00000597261 NKRFO15226 690 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHERP-206ENST00000597261 PRPF3O43395 683 aaKnown RBP18.89■□□□□ 0.61
CHERP-206ENST00000597261 PTGS1P23219 599 aa18.89■□□□□ 0.61
CHERP-206ENST00000597261 PGM5Q15124 567 aa18.89■□□□□ 0.61
CHERP-206ENST00000597261 WWC2Q6AWC2 1192 aa18.89■□□□□ 0.61
CHERP-206ENST00000597261 TLK2Q86UE8 772 aa18.89■□□□□ 0.61
CHERP-206ENST00000597261 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
CHERP-206ENST00000597261 LCTP09848 1927 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 TXNP10599 105 aaKnown RBP18.88■□□□□ 0.61
CHERP-206ENST00000597261 IFNAR1P17181 557 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 ATN1P54259 1190 aaPredicted RBP18.88■□□□□ 0.61
CHERP-206ENST00000597261 TTLL4Q14679 1199 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 PKN1Q16512 942 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 FSCN1Q16658 493 aaKnown RBP18.88■□□□□ 0.61
CHERP-206ENST00000597261 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
CHERP-206ENST00000597261 TYW1BQ6NUM6 668 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 SEPT14Q6ZU15 432 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 HEATR3Q7Z4Q2 680 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 SMARCC2Q8TAQ2 1214 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 CUL5Q93034 780 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 LARP6Q9BRS8 491 aaKnown RBP18.88■□□□□ 0.61
CHERP-206ENST00000597261 BARHL2Q9NY43 387 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 ELP1O95163 1332 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 FRMPD4Q14CM0 1322 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 MCM3APO60318 1980 aa18.88■□□□□ 0.61
CHERP-206ENST00000597261 A0A1W2PQ45 241 aaPredicted RBP18.87■□□□□ 0.61
CHERP-206ENST00000597261 A0A1W2PQY0 241 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 hCG_1984214I3L0E3 225 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 STXBP3O00186 592 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 RGS20O76081 388 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 ARIH2O95376 493 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 ASGR1P07306 291 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 CCT2P78371 535 aaKnown RBP18.87■□□□□ 0.61
CHERP-206ENST00000597261 BEX3Q00994 111 aa18.87■□□□□ 0.61
CHERP-206ENST00000597261 ZNF713Q8N859 430 aaPredicted RBP18.87■□□□□ 0.61
CHERP-206ENST00000597261 GPKOWQ92917 476 aaPredicted RBP eCLIP18.87■□□□□ 0.61
CHERP-206ENST00000597261 DDX41Q9UJV9 622 aaKnown RBP18.87■□□□□ 0.61
CHERP-206ENST00000597261 TGFB3P10600 412 aa18.86■□□□□ 0.61
CHERP-206ENST00000597261 MYCLP12524 364 aaPredicted RBP18.86■□□□□ 0.61
CHERP-206ENST00000597261 CCND2P30279 289 aa18.86■□□□□ 0.61
CHERP-206ENST00000597261 CDK7P50613 346 aa18.86■□□□□ 0.61
CHERP-206ENST00000597261 PPP1R18Q6NYC8 613 aa18.86■□□□□ 0.61
CHERP-206ENST00000597261 XRRA1Q6P2D8 792 aa18.86■□□□□ 0.61
CHERP-206ENST00000597261 IL31RAQ8NI17 732 aa18.86■□□□□ 0.61
CHERP-206ENST00000597261 NCOA5Q9HCD5 579 aaKnown RBP18.86■□□□□ 0.61
CHERP-206ENST00000597261 RIC8AQ9NPQ8 531 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms