RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 CNTN2Q02246 1040 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 PTPN11Q06124 597 aaPredicted RBP9.95□□□□□ -0.82
FARP1-217ENST00000596467 BFSP2Q13515 415 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 COL19A1Q14993 1142 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 SLC9C2Q5TAH2 1124 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 C12orf60Q5U649 245 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 TAPT1Q6NXT6 567 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 ADHFE1Q8IWW8 467 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 CPXCR1Q8N123 301 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 RETREG2Q8NC44 543 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.95□□□□□ -0.82
FARP1-217ENST00000596467 EAF2Q96CJ1 260 aaPredicted RBP9.95□□□□□ -0.82
FARP1-217ENST00000596467 RAD9AQ99638 391 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 FTOQ9C0B1 505 aaKnown RBP eCLIP9.95□□□□□ -0.82
FARP1-217ENST00000596467 TLR7Q9NYK1 1049 aaKnown RBP9.95□□□□□ -0.82
FARP1-217ENST00000596467 CTNNA3Q9UI47 895 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 NOP58Q9Y2X3 529 aaKnown RBP9.95□□□□□ -0.82
FARP1-217ENST00000596467 COL4A6Q14031 1691 aa9.95□□□□□ -0.82
FARP1-217ENST00000596467 WDR87Q6ZQQ6 2873 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 TCRBV5S4A2TA0A5A2 114 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 LINC01553A4QN01 128 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 F5H6K3 240 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 GJB5O95377 273 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 PARNO95453 639 aaKnown RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 PDE6AP16499 860 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 KLRC3Q07444 240 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 OS9Q13438 667 aaPredicted RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 DUSP28Q4G0W2 176 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 HERC4Q5GLZ8 1057 aaPredicted RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 AMOTL1Q8IY63 956 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 PRSS33Q8NF86 280 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 PABPC5Q96DU9 382 aaKnown RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 CCDC8Q9H0W5 538 aaPredicted RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 ACAD9Q9H845 621 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 VTA1Q9NP79 307 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 NYAP2Q9P242 653 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 SYNPO2Q9UMS6 1093 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 CTDP1Q9Y5B0 961 aaPredicted RBP9.94□□□□□ -0.82
FARP1-217ENST00000596467 CACNA1BQ00975 2339 aa9.94□□□□□ -0.82
FARP1-217ENST00000596467 ZNF532Q9HCE3 1301 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 SOWAHBA6NEL2 793 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 RAD21O60216 631 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 EFCAB14O75071 495 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
FARP1-217ENST00000596467 IRS1P35568 1242 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 CPT1AP50416 773 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 LCORLQ8N3X6 602 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 MORC4Q8TE76 937 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 MRPL38Q96DV4 380 aaKnown RBP9.93□□□□□ -0.82
FARP1-217ENST00000596467 NUP88Q99567 741 aaPredicted RBP9.93□□□□□ -0.82
FARP1-217ENST00000596467 MTG1Q9BT17 334 aaPredicted RBP9.93□□□□□ -0.82
FARP1-217ENST00000596467 ZBED2Q9BTP6 218 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.93□□□□□ -0.82
FARP1-217ENST00000596467 A1CFQ9NQ94 594 aaKnown RBP9.93□□□□□ -0.82
FARP1-217ENST00000596467 PDGFCQ9NRA1 345 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 FEM1BQ9UK73 627 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
FARP1-217ENST00000596467 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 LOC102724159A0A0B4J2E5 919 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 ABHD14A-ACY1A0A1B0GW23 586 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 MAP3K7O43318 606 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 NDUFB10O96000 172 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 ATP8B2P98198 1209 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 RBL2Q08999 1139 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 PWP2Q15269 919 aaKnown RBP9.92□□□□□ -0.82
FARP1-217ENST00000596467 TKFCQ3LXA3 575 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 TIGD5Q53EQ6 642 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 CNKSR3Q6P9H4 555 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 RPAP2Q8IXW5 612 aaPredicted RBP9.92□□□□□ -0.82
FARP1-217ENST00000596467 CCDC155Q8N6L0 562 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 AFAP1L1Q8TED9 768 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 ANKS1AQ92625 1134 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 EDAQ92838 391 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 POP1Q99575 1024 aaKnown RBP9.92□□□□□ -0.82
FARP1-217ENST00000596467 EPAS1Q99814 870 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 CDHR5Q9HBB8 845 aa9.92□□□□□ -0.82
FARP1-217ENST00000596467 DMXL1Q9Y485 3027 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 H3BQ06 376 aaPredicted RBP9.91□□□□□ -0.82
FARP1-217ENST00000596467 NCK2O43639 380 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 GFRA3O60609 400 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 KPNA6O60684 536 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 CXCL10P02778 98 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 PTGS1P23219 599 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 RARSP54136 660 aaKnown RBP9.91□□□□□ -0.82
FARP1-217ENST00000596467 DEFB103AP81534 67 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 TCF15Q12870 199 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 GPNMBQ14956 572 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 SMAD2Q15796 467 aaKnown RBP9.91□□□□□ -0.82
FARP1-217ENST00000596467 PTPROQ16827 1216 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 NBPF20Q3BBV1 942 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 KIAA1211Q6ZU35 1233 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 ERMP1Q7Z2K6 904 aa9.91□□□□□ -0.82
FARP1-217ENST00000596467 FBXO16Q8IX29 292 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms