RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 CYP2C19P33261 490 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
VRK3-211ENST00000596445 NLRP5P59047 1200 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 UBXN2AP68543 259 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 CACNB2Q08289 660 aaPredicted RBP9.59□□□□□ -0.87
VRK3-211ENST00000596445 TRIM32Q13049 653 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 UBE2SQ16763 222 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 MAP3K21Q5TCX8 1036 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 ARHGEF16Q5VV41 709 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 MCTP2Q6DN12 878 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 GALNT17Q6IS24 598 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 ARMCX2Q7L311 632 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 FCHSD1Q86WN1 690 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 SHISA4Q96DD7 197 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 ZNF333Q96JL9 665 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 PXMP2Q9NR77 195 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 NRBP1Q9UHY1 535 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 KIF3AQ9Y496 699 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.59□□□□□ -0.87
VRK3-211ENST00000596445 LRRC37A2A6NM11 1700 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 DNAH12Q6ZR08 3092 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 FRMPD4Q14CM0 1322 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 SPDYE3A6NKU9 549 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 SNAI1O95863 264 aaPredicted RBP9.58□□□□□ -0.88
VRK3-211ENST00000596445 FOSP01100 380 aaPredicted RBP9.58□□□□□ -0.88
VRK3-211ENST00000596445 PRKAR2AP13861 404 aaKnown RBP9.58□□□□□ -0.88
VRK3-211ENST00000596445 EDNRBP24530 442 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 PDE4DQ08499 809 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 AP3B2Q13367 1082 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 REXO1Q8N1G1 1221 aaKnown RBP9.58□□□□□ -0.88
VRK3-211ENST00000596445 FAM184AQ8NB25 1140 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 DAGLBQ8NCG7 672 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 PHF20Q9BVI0 1012 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 ABHD16BQ9H3Z7 469 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 EHMT1Q9H9B1 1298 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.58□□□□□ -0.88
VRK3-211ENST00000596445 PCDHA4Q9UN74 947 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 CNPY2Q9Y2B0 182 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 MYH7BA7E2Y1 1941 aa9.58□□□□□ -0.88
VRK3-211ENST00000596445 RPTORQ8N122 1335 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 NR3C2P08235 984 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 CYBAP13498 195 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 EIF2AK2P19525 551 aaKnown RBP9.57□□□□□ -0.88
VRK3-211ENST00000596445 GJB2P29033 226 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 CCND2P30279 289 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 ACVR2BQ13705 512 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 TRIM29Q14134 588 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 PGM5Q15124 567 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 NPY5RQ15761 445 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 STXBP2Q15833 593 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 VSIG10LQ86VR7 867 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 TNS4Q8IZW8 715 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 BLIDQ8IZY5 108 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 TRPV1Q8NER1 839 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 INTS4Q96HW7 963 aaKnown RBP9.57□□□□□ -0.88
VRK3-211ENST00000596445 C8orf76Q96K31 380 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 PDCD2LQ9BRP1 358 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 KATNBL1Q9H079 304 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 HMX1Q9NP08 348 aaPredicted RBP9.57□□□□□ -0.88
VRK3-211ENST00000596445 VTA1Q9NP79 307 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 GJB4Q9NTQ9 266 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 PCDHA6Q9UN73 950 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 KCNJ14Q9UNX9 436 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 SMC3Q9UQE7 1217 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 PCDHA8Q9Y5H6 950 aa9.57□□□□□ -0.88
VRK3-211ENST00000596445 DDX49Q9Y6V7 483 aaKnown RBP9.57□□□□□ -0.88
VRK3-211ENST00000596445 M0R2N6 131 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 ADAMTS3O15072 1205 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 SEPT4O43236 478 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 EIF3JO75822 258 aaKnown RBP9.56□□□□□ -0.88
VRK3-211ENST00000596445 STAM2O75886 525 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 MMP1P03956 469 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
VRK3-211ENST00000596445 CCL5P13501 91 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 CCND3P30281 292 aaPredicted RBP9.56□□□□□ -0.88
VRK3-211ENST00000596445 MTFR1Q15390 333 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 JAKMIP3Q5VZ66 844 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 PCNX4Q63HM2 1172 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 KRT40Q6A162 431 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 XRRA1Q6P2D8 792 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 FBXO18Q8NFZ0 1043 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 IL31RAQ8NI17 732 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 ANO3Q9BYT9 981 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 RNF208Q9H0X6 261 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 BRMS1Q9HCU9 246 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 TMEM260Q9NX78 707 aa9.56□□□□□ -0.88
VRK3-211ENST00000596445 KIAA0100Q14667 2235 aaKnown RBP9.56□□□□□ -0.88
VRK3-211ENST00000596445 MKI67P46013 3256 aaKnown RBP9.56□□□□□ -0.88
VRK3-211ENST00000596445 FRMPD3Q5JV73 1810 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
VRK3-211ENST00000596445 MYCLP12524 364 aaPredicted RBP9.55□□□□□ -0.88
VRK3-211ENST00000596445 CNGA1P29973 690 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 KRT2P35908 639 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 SREBF1P36956 1147 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 FOSBP53539 338 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 MRPS9P82933 396 aaKnown RBP9.55□□□□□ -0.88
VRK3-211ENST00000596445 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms