RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 PRAMEF19Q5SWL8 479 aa23.03■■□□□ 1.28
CCDC61-205ENST00000596161 FCHSD1Q86WN1 690 aa23.03■■□□□ 1.28
CCDC61-205ENST00000596161 FAM177A1Q8N128 213 aaPredicted RBP23.03■■□□□ 1.28
CCDC61-205ENST00000596161 RIC8AQ9NPQ8 531 aa23.03■■□□□ 1.28
CCDC61-205ENST00000596161 SH3GLB2Q9NR46 395 aa23.03■■□□□ 1.28
CCDC61-205ENST00000596161 PXMP2Q9NR77 195 aa23.03■■□□□ 1.28
CCDC61-205ENST00000596161 ZHX1Q9UKY1 873 aaPredicted RBP23.03■■□□□ 1.28
CCDC61-205ENST00000596161 SMCO2A6NFE2 343 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 MEIS2O14770 477 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 SEPT4O43236 478 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 EDNRBP24530 442 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 TYW1BQ6NUM6 668 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 USP17L6PQ6QN14 398 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 TRPV1Q8NER1 839 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 WASF1Q92558 559 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 DEFB118Q96PH6 123 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 C6orf50Q9HD87 102 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 VTA1Q9NP79 307 aa23.02■■□□□ 1.28
CCDC61-205ENST00000596161 CTDNEP1O95476 244 aa23.01■■□□□ 1.27
CCDC61-205ENST00000596161 ZNF865P0CJ78 1059 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-205ENST00000596161 EIF2AK2P19525 551 aaKnown RBP23.01■■□□□ 1.27
CCDC61-205ENST00000596161 CCDC83Q8IWF9 413 aa23.01■■□□□ 1.27
CCDC61-205ENST00000596161 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
CCDC61-205ENST00000596161 ORC3Q9UBD5 711 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-205ENST00000596161 DDX20Q9UHI6 824 aaKnown RBP23.01■■□□□ 1.27
CCDC61-205ENST00000596161 FAM184BQ9ULE4 1060 aa23.01■■□□□ 1.27
CCDC61-205ENST00000596161 SPDYE3A6NKU9 549 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 AKR1A1P14550 325 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 XBP1P17861 261 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 GNA11P29992 359 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 GJA8P48165 433 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 STXBP2Q15833 593 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 MCTP2Q6DN12 878 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 NSUN7Q8NE18 718 aaKnown RBP23■■□□□ 1.27
CCDC61-205ENST00000596161 BICD2Q8TD16 824 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 U2AF1L4Q8WU68 220 aaKnown RBP23■■□□□ 1.27
CCDC61-205ENST00000596161 PDCD2LQ9BRP1 358 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 ZMYND12Q9H0C1 365 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 EHMT1Q9H9B1 1298 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 VPS54Q9P1Q0 977 aa23■■□□□ 1.27
CCDC61-205ENST00000596161 SGPL1O95470 568 aa22.99■■□□□ 1.27
CCDC61-205ENST00000596161 FOSP01100 380 aaPredicted RBP22.99■■□□□ 1.27
CCDC61-205ENST00000596161 NR3C2P08235 984 aa22.99■■□□□ 1.27
CCDC61-205ENST00000596161 UBE2SQ16763 222 aa22.99■■□□□ 1.27
CCDC61-205ENST00000596161 KATNBL1Q9H079 304 aa22.99■■□□□ 1.27
CCDC61-205ENST00000596161 MCM3APO60318 1980 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 CCND2P30279 289 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 SOX10P56693 466 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 NLRP5P59047 1200 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 ST3GAL1Q11201 340 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 AP3B2Q13367 1082 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 EEPD1Q7L9B9 569 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 FBXO16Q8IX29 292 aaPredicted RBP22.98■■□□□ 1.27
CCDC61-205ENST00000596161 DDX49Q9Y6V7 483 aaKnown RBP22.98■■□□□ 1.27
CCDC61-205ENST00000596161 LRRC37A2A6NM11 1700 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 FRMPD4Q14CM0 1322 aa22.98■■□□□ 1.27
CCDC61-205ENST00000596161 POTEFA5A3E0 1075 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 TFRCP02786 760 aaKnown RBP22.97■■□□□ 1.27
CCDC61-205ENST00000596161 PGM5Q15124 567 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 CCDC144BQ3MJ40 725 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 TMX3Q96JJ7 454 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 CRISPLD2Q9H0B8 497 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 PCDHA6Q9UN73 950 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 PCDHA8Q9Y5H6 950 aa22.97■■□□□ 1.27
CCDC61-205ENST00000596161 EIF3JO75822 258 aaKnown RBP22.96■■□□□ 1.27
CCDC61-205ENST00000596161 CD2BP2O95400 341 aaKnown RBP22.96■■□□□ 1.27
CCDC61-205ENST00000596161 RARBP10826 455 aa22.96■■□□□ 1.27
CCDC61-205ENST00000596161 MYCLP12524 364 aaPredicted RBP22.96■■□□□ 1.27
CCDC61-205ENST00000596161 HMGN5P82970 282 aaKnown RBP22.96■■□□□ 1.27
CCDC61-205ENST00000596161 LHX8Q68G74 356 aa22.96■■□□□ 1.27
CCDC61-205ENST00000596161 IQSEC1Q6DN90 963 aa22.96■■□□□ 1.27
CCDC61-205ENST00000596161 GALNT17Q6IS24 598 aa22.96■■□□□ 1.27
CCDC61-205ENST00000596161 XRRA1Q6P2D8 792 aa22.96■■□□□ 1.27
CCDC61-205ENST00000596161 REXO1Q8N1G1 1221 aaKnown RBP22.96■■□□□ 1.27
CCDC61-205ENST00000596161 ALG1Q9BT22 464 aa22.96■■□□□ 1.27
CCDC61-205ENST00000596161 JAK2O60674 1132 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 STAM2O75886 525 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 CLK2P49760 499 aaKnown RBP22.95■■□□□ 1.26
CCDC61-205ENST00000596161 TAPT1Q6NXT6 567 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 VSIG10LQ86VR7 867 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 SCFD2Q8WU76 684 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 AIFM3Q96NN9 605 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 OGDHLQ9ULD0 1010 aa22.95■■□□□ 1.26
CCDC61-205ENST00000596161 RBM47A0AV96 593 aaKnown RBP22.94■■□□□ 1.26
CCDC61-205ENST00000596161 FDPSP14324 419 aaKnown RBP22.94■■□□□ 1.26
CCDC61-205ENST00000596161 ADCYAP1R1P41586 468 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 TNFAIP2Q03169 654 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 PCNX4Q63HM2 1172 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 ANKLE1Q8NAG6 615 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 IL31RAQ8NI17 732 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 ANO3Q9BYT9 981 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 PCDHA4Q9UN74 947 aa22.94■■□□□ 1.26
CCDC61-205ENST00000596161 DUSP11O75319 330 aaKnown RBP22.93■■□□□ 1.26
CCDC61-205ENST00000596161 CAPN15O75808 1086 aa22.93■■□□□ 1.26
CCDC61-205ENST00000596161 EN2P19622 333 aaPredicted RBP22.93■■□□□ 1.26
CCDC61-205ENST00000596161 TRIM29Q14134 588 aa22.93■■□□□ 1.26
CCDC61-205ENST00000596161 ANO1Q5XXA6 986 aa22.93■■□□□ 1.26
CCDC61-205ENST00000596161 DAGLBQ8NCG7 672 aa22.93■■□□□ 1.26
CCDC61-205ENST00000596161 SHISA4Q96DD7 197 aa22.93■■□□□ 1.26
CCDC61-205ENST00000596161 XPNPEP3Q9NQH7 507 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms