RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 TNFAIP2Q03169 654 aa25.28■■□□□ 1.64
HOMER3-206ENST00000594439 IQSEC1Q6DN90 963 aa25.28■■□□□ 1.64
HOMER3-206ENST00000594439 GPKOWQ92917 476 aaPredicted RBP eCLIP25.28■■□□□ 1.64
HOMER3-206ENST00000594439 ZNF274Q96GC6 653 aaPredicted RBP25.28■■□□□ 1.64
HOMER3-206ENST00000594439 IWS1Q96ST2 819 aa25.28■■□□□ 1.64
HOMER3-206ENST00000594439 LARP6Q9BRS8 491 aaKnown RBP25.28■■□□□ 1.64
HOMER3-206ENST00000594439 MYCNP04198 464 aaPredicted RBP25.27■■□□□ 1.64
HOMER3-206ENST00000594439 SMPD1P17405 629 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 NTRK3Q16288 839 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 TMEM63BQ5T3F8 832 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 ARHGEF16Q5VV41 709 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 WWC2Q6AWC2 1192 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 HEATR3Q7Z4Q2 680 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 UPF3AQ9H1J1 476 aaKnown RBP25.27■■□□□ 1.64
HOMER3-206ENST00000594439 GNEQ9Y223 722 aaKnown RBP25.27■■□□□ 1.64
HOMER3-206ENST00000594439 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 KIAA1217Q5T5P2 1943 aa25.27■■□□□ 1.64
HOMER3-206ENST00000594439 KBTBD13C9JR72 458 aa25.26■■□□□ 1.63
HOMER3-206ENST00000594439 GJA9P57773 515 aa25.26■■□□□ 1.63
HOMER3-206ENST00000594439 CCT2P78371 535 aaKnown RBP25.26■■□□□ 1.63
HOMER3-206ENST00000594439 RNF180Q86T96 592 aa25.26■■□□□ 1.63
HOMER3-206ENST00000594439 FCHSD1Q86WN1 690 aa25.26■■□□□ 1.63
HOMER3-206ENST00000594439 KLHDC9Q8NEP7 349 aa25.26■■□□□ 1.63
HOMER3-206ENST00000594439 PDCD2LQ9BRP1 358 aa25.26■■□□□ 1.63
HOMER3-206ENST00000594439 NCOA5Q9HCD5 579 aaKnown RBP25.26■■□□□ 1.63
HOMER3-206ENST00000594439 MYADML2A6NDP7 307 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 PIK3CDO00329 1044 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 MEIS2O14770 477 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 NR3C2P08235 984 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 NKX3-2P78367 333 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 IRX5P78411 483 aaPredicted RBP25.25■■□□□ 1.63
HOMER3-206ENST00000594439 TYW1BQ6NUM6 668 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 USP17L6PQ6QN14 398 aa25.25■■□□□ 1.63
HOMER3-206ENST00000594439 FRMPD4Q14CM0 1322 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 CTAGE5O15320 804 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 PTGS1P23219 599 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 CST5P28325 142 aaPredicted RBP25.24■■□□□ 1.63
HOMER3-206ENST00000594439 STXBP2Q15833 593 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 NOL8Q76FK4 1167 aaKnown RBP25.24■■□□□ 1.63
HOMER3-206ENST00000594439 WDR11Q9BZH6 1224 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 SENP6Q9GZR1 1112 aaPredicted RBP25.24■■□□□ 1.63
HOMER3-206ENST00000594439 PSTPIP2Q9H939 334 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 PHF24Q9UPV7 400 aa25.24■■□□□ 1.63
HOMER3-206ENST00000594439 hCG_1984214I3L0E3 225 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 STXBP3O00186 592 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 PRPF3O43395 683 aaKnown RBP25.23■■□□□ 1.63
HOMER3-206ENST00000594439 IFNAR1P17181 557 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 AK2P54819 239 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 PGM5Q15124 567 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 PFKFB3Q16875 520 aaPredicted RBP25.23■■□□□ 1.63
HOMER3-206ENST00000594439 DUSP28Q4G0W2 176 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 CCSAPQ6IQ19 270 aaPredicted RBP25.23■■□□□ 1.63
HOMER3-206ENST00000594439 PPP1R18Q6NYC8 613 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 TLK2Q86UE8 772 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 ZNF713Q8N859 430 aaPredicted RBP25.23■■□□□ 1.63
HOMER3-206ENST00000594439 IL31RAQ8NI17 732 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 SMARCC2Q8TAQ2 1214 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 SCFD2Q8WU76 684 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 DPF3Q92784 378 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 CUL5Q93034 780 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 PHKBQ93100 1093 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 TSEN34Q9BSV6 310 aaKnown RBP25.23■■□□□ 1.63
HOMER3-206ENST00000594439 SPC25Q9HBM1 224 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 Q9Y3F1 56 aa25.23■■□□□ 1.63
HOMER3-206ENST00000594439 C6orf222P0C671 652 aaPredicted RBP25.22■■□□□ 1.63
HOMER3-206ENST00000594439 PKN1Q16512 942 aa25.22■■□□□ 1.63
HOMER3-206ENST00000594439 VSIG10LQ86VR7 867 aa25.22■■□□□ 1.63
HOMER3-206ENST00000594439 BARHL2Q9NY43 387 aa25.22■■□□□ 1.63
HOMER3-206ENST00000594439 TPCN1Q9ULQ1 816 aa25.22■■□□□ 1.63
HOMER3-206ENST00000594439 DYNC1LI2O43237 492 aaPredicted RBP25.21■■□□□ 1.63
HOMER3-206ENST00000594439 EIF3JO75822 258 aaKnown RBP25.21■■□□□ 1.63
HOMER3-206ENST00000594439 MYCLP12524 364 aaPredicted RBP25.21■■□□□ 1.63
HOMER3-206ENST00000594439 SCG2P13521 617 aa25.21■■□□□ 1.63
HOMER3-206ENST00000594439 NAPAP54920 295 aa25.21■■□□□ 1.63
HOMER3-206ENST00000594439 STK3Q13188 491 aa25.21■■□□□ 1.63
HOMER3-206ENST00000594439 ANKRD1Q15327 319 aa25.21■■□□□ 1.63
HOMER3-206ENST00000594439 LRRC26Q2I0M4 334 aa25.21■■□□□ 1.63
HOMER3-206ENST00000594439 RNF26Q9BY78 433 aaPredicted RBP25.21■■□□□ 1.63
HOMER3-206ENST00000594439 RBM27Q9P2N5 1060 aaKnown RBP25.21■■□□□ 1.63
HOMER3-206ENST00000594439 ARIH2O95376 493 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 NEK4P51957 841 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 KCNA10Q16322 511 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 UBE2SQ16763 222 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 CCDC62Q6P9F0 684 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 SEPT14Q6ZU15 432 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 FERMT2Q96AC1 680 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 AP5M1Q9H0R1 490 aa25.2■■□□□ 1.62
HOMER3-206ENST00000594439 PPFIA3O75145 1194 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 RGS20O76081 388 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 CCND2P30279 289 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 ACLYP53396 1101 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 BEX3Q00994 111 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 TTLL4Q14679 1199 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 GNASQ5JWF2 1037 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 KIF2CQ99661 725 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 SLC26A6Q9BXS9 759 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 C22orf23Q9BZE7 217 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 RIC8AQ9NPQ8 531 aa25.19■■□□□ 1.62
HOMER3-206ENST00000594439 A0A1W2PQ45 241 aaPredicted RBP25.18■■□□□ 1.62
HOMER3-206ENST00000594439 A0A1W2PQY0 241 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms