RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PLCG2P16885 1265 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 LRRC63Q05C16 580 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 KIF5AQ12840 1032 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 PDIA5Q14554 519 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 TBCKQ8TEA7 893 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 SH2D4AQ9H788 454 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 HPCAL4Q9UM19 191 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 TFR2Q9UP52 801 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 PRPF6O94906 941 aaKnown RBP12.92□□□□□ -0.34
ZNF540-210ENST00000592533 FGFR1OPO95684 399 aaKnown RBP12.92□□□□□ -0.34
ZNF540-210ENST00000592533 GOLGA8HP0CJ92 632 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 TECP42680 631 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
ZNF540-210ENST00000592533 MAN2A1Q16706 1144 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 SV2BQ7L1I2 683 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 CCDC84Q86UT8 332 aaPredicted RBP12.92□□□□□ -0.34
ZNF540-210ENST00000592533 COG1Q8WTW3 980 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 PNMA5Q96PV4 448 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 PJA2O43164 708 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 IVLP07476 585 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 IL1R1P14778 569 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 MAPKAPK5Q8IW41 473 aa12.92□□□□□ -0.34
ZNF540-210ENST00000592533 MYMKA6NI61 221 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
ZNF540-210ENST00000592533 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 SYF2O95926 243 aaKnown RBP12.91□□□□□ -0.34
ZNF540-210ENST00000592533 PSMD2Q13200 908 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 TMEM119Q4V9L6 283 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 NDST4Q9H3R1 872 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 ARHGAP20Q9P2F6 1191 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 ANKIB1Q9P2G1 1089 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 GAKO14976 1311 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 EDIL3O43854 480 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 BTDP43251 543 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 SPA17Q15506 151 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 CCNI2Q6ZMN8 369 aaPredicted RBP12.91□□□□□ -0.34
ZNF540-210ENST00000592533 LRRC55Q6ZSA7 311 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 CREG2Q8IUH2 290 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 LRRC27Q9C0I9 530 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
ZNF540-210ENST00000592533 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 IDEP14735 1019 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 RHBDL3P58872 404 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 CALCRLQ16602 461 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 PROM2Q8N271 834 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 LARP4BQ92615 738 aaKnown RBP12.91□□□□□ -0.34
ZNF540-210ENST00000592533 CEP95Q96GE4 821 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 SAP30BPQ9UHR5 308 aaKnown RBP12.91□□□□□ -0.34
ZNF540-210ENST00000592533 PCDHA13Q9Y5I0 950 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 DUSP10Q9Y6W6 482 aa12.91□□□□□ -0.34
ZNF540-210ENST00000592533 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
ZNF540-210ENST00000592533 GNPATO15228 680 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 CAPN2P17655 700 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 KCNQ4P56696 695 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
ZNF540-210ENST00000592533 SEPT2Q15019 361 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
ZNF540-210ENST00000592533 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 SMIM5Q71RC9 77 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 AENQ8WTP8 325 aaKnown RBP12.9□□□□□ -0.34
ZNF540-210ENST00000592533 BAP1Q92560 729 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 RAD54LQ92698 747 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 PIGSQ96S52 555 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 RIC8AQ9NPQ8 531 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 RBAK-RBAKDNI3L0D1 243 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 TACC1O75410 805 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 CYP27A1Q02318 531 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 TMEM266Q2M3C6 531 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 ASPRV1Q53RT3 343 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
ZNF540-210ENST00000592533 RAB34Q9BZG1 259 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 CPVLQ9H3G5 476 aa12.9□□□□□ -0.34
ZNF540-210ENST00000592533 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
ZNF540-210ENST00000592533 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 PDHBP11177 359 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 KIF11P52732 1056 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 NFIXQ14938 502 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 TEX11Q8IYF3 940 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 CCDC155Q8N6L0 562 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
ZNF540-210ENST00000592533 SLC39A2Q9NP94 309 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 EPHB6O15197 1021 aa12.89□□□□□ -0.35
ZNF540-210ENST00000592533 RNF40O75150 1001 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms