RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 PPP4R3BQ5MIZ7 849 aa17.47■□□□□ 0.39
SF3A2-206ENST00000592314 TMCO2Q7Z6W1 182 aaPredicted RBP17.47■□□□□ 0.39
SF3A2-206ENST00000592314 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
SF3A2-206ENST00000592314 TRIOO75962 3097 aa17.47■□□□□ 0.39
SF3A2-206ENST00000592314 MYH6P13533 1939 aa17.47■□□□□ 0.39
SF3A2-206ENST00000592314 SIP14410 1827 aa17.47■□□□□ 0.39
SF3A2-206ENST00000592314 LOC102724159A0A0B4J2E5 919 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 A6NJR5 290 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 LPXNO60711 386 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 PDHBP11177 359 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 MX1P20591 662 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 RPS6P62753 249 aaKnown RBP17.46■□□□□ 0.39
SF3A2-206ENST00000592314 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 PWP2Q15269 919 aaKnown RBP17.46■□□□□ 0.39
SF3A2-206ENST00000592314 TCTN1Q2MV58 587 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 ARNTL2Q8WYA1 636 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 KHSRPQ92945 711 aaKnown RBP eCLIP17.46■□□□□ 0.39
SF3A2-206ENST00000592314 SLC9A7Q96T83 725 aa17.46■□□□□ 0.39
SF3A2-206ENST00000592314 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SF3A2-206ENST00000592314 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
SF3A2-206ENST00000592314 GRB10Q13322 594 aa17.45■□□□□ 0.38
SF3A2-206ENST00000592314 RNF207Q6ZRF8 634 aa17.45■□□□□ 0.38
SF3A2-206ENST00000592314 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
SF3A2-206ENST00000592314 CPVLQ9H3G5 476 aa17.45■□□□□ 0.38
SF3A2-206ENST00000592314 EPHX3Q9H6B9 360 aa17.45■□□□□ 0.38
SF3A2-206ENST00000592314 TLL1O43897 1013 aa17.44■□□□□ 0.38
SF3A2-206ENST00000592314 RFC2P35250 354 aa17.44■□□□□ 0.38
SF3A2-206ENST00000592314 PDE4DQ08499 809 aa17.44■□□□□ 0.38
SF3A2-206ENST00000592314 ZNF543Q08ER8 600 aa17.44■□□□□ 0.38
SF3A2-206ENST00000592314 SCFD2Q8WU76 684 aa17.44■□□□□ 0.38
SF3A2-206ENST00000592314 DHX38Q92620 1227 aaKnown RBP17.44■□□□□ 0.38
SF3A2-206ENST00000592314 FAM227BQ96M60 508 aa17.44■□□□□ 0.38
SF3A2-206ENST00000592314 MYH7BA7E2Y1 1941 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
SF3A2-206ENST00000592314 FGAP02671 866 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 ACTN1P12814 892 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 DEFB103AP81534 67 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 ALX1Q15699 326 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
SF3A2-206ENST00000592314 CCDC62Q6P9F0 684 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 ZNF589Q86UQ0 364 aaPredicted RBP17.43■□□□□ 0.38
SF3A2-206ENST00000592314 PHOSPHO2Q8TCD6 241 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 KAT2BQ92831 832 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 CRBNQ96SW2 442 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
SF3A2-206ENST00000592314 COL20A1Q9P218 1284 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 WDR19Q8NEZ3 1342 aa17.43■□□□□ 0.38
SF3A2-206ENST00000592314 MUC6Q6W4X9 2439 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 PIEZO1Q92508 2521 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
SF3A2-206ENST00000592314 TXNP10599 105 aaKnown RBP17.42■□□□□ 0.38
SF3A2-206ENST00000592314 HAND2P61296 217 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 WDR5P61964 334 aaKnown RBP17.42■□□□□ 0.38
SF3A2-206ENST00000592314 ARHGAP1Q07960 439 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 GDF6Q6KF10 455 aaPredicted RBP17.42■□□□□ 0.38
SF3A2-206ENST00000592314 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 GDPD5Q8WTR4 605 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 TBC1D5Q92609 795 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
SF3A2-206ENST00000592314 C11orf16Q9NQ32 467 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 TCP11L1Q9NUJ3 509 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 MICAL3Q7RTP6 2002 aa17.42■□□□□ 0.38
SF3A2-206ENST00000592314 MMP3P08254 477 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 CHMP4BP1P59074 171 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 PTPN11Q06124 597 aaPredicted RBP17.41■□□□□ 0.38
SF3A2-206ENST00000592314 AAK1Q2M2I8 961 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 USH1GQ495M9 461 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 DNERQ8NFT8 737 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 AFG1LQ8WV93 481 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 FAM122AQ96E09 287 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 LRFN3Q9BTN0 628 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 C1QTNF1Q9BXJ1 281 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 CD320Q9NPF0 282 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 RAD50Q92878 1312 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 ATG2AQ2TAZ0 1938 aa17.41■□□□□ 0.38
SF3A2-206ENST00000592314 NBNO60934 754 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 BAIAP3O94812 1187 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
SF3A2-206ENST00000592314 PTGISQ16647 500 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 LY6KQ17RY6 165 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 WNT8BQ93098 351 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 COG5Q9UP83 839 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 ZMYM6O95789 1325 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 NEDD4P46934 1319 aa17.4■□□□□ 0.38
SF3A2-206ENST00000592314 KPNA6O60684 536 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 BFSP2Q13515 415 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 BRDTQ58F21 947 aaPredicted RBP17.39■□□□□ 0.37
SF3A2-206ENST00000592314 TRAF7Q6Q0C0 670 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 SESTD1Q86VW0 696 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 AFAP1L1Q8TED9 768 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 HLA-CQ95604 372 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 HELLSQ9NRZ9 838 aa17.39■□□□□ 0.37
SF3A2-206ENST00000592314 NOD1Q9Y239 953 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms