RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 MAFAQ8NHW3 353 aaPredicted RBP11.87□□□□□ -0.51
VMP1-214ENST00000592106 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.51
VMP1-214ENST00000592106 WDR11Q9BZH6 1224 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 KRT23Q9C075 422 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 PDGFCQ9NRA1 345 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 LCTP09848 1927 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 SUPT20HL2P0C7V6 817 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 CSF2RAP15509 400 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 RAB30Q15771 203 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 USH1GQ495M9 461 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 TMEM240Q5SV17 173 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 SCFD2Q8WU76 684 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 MYLIPQ8WY64 445 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 TIFAQ96CG3 184 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 UBAC1Q9BSL1 405 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 IL23AQ9NPF7 189 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 ABCB11O95342 1321 aa11.86□□□□□ -0.51
VMP1-214ENST00000592106 RBM47A0AV96 593 aaKnown RBP11.85□□□□□ -0.51
VMP1-214ENST00000592106 DHX16O60231 1041 aaKnown RBP11.85□□□□□ -0.51
VMP1-214ENST00000592106 B4GALT4O60513 344 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 KPNA6O60684 536 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 KDM4AO75164 1064 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 MYL3P08590 195 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 CYP2C18P33260 490 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 RPS6P62753 249 aaKnown RBP11.85□□□□□ -0.51
VMP1-214ENST00000592106 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 MCF2L2Q86YR7 1114 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
VMP1-214ENST00000592106 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 CLEC4DQ8WXI8 215 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 ZKSCAN3Q9BRR0 538 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 MTG1Q9BT17 334 aaPredicted RBP11.85□□□□□ -0.51
VMP1-214ENST00000592106 TTYH1Q9H313 450 aaPredicted RBP11.85□□□□□ -0.51
VMP1-214ENST00000592106 MSRAQ9UJ68 235 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 SZT2Q5T011 3432 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 TNKSO95271 1327 aa11.85□□□□□ -0.51
VMP1-214ENST00000592106 B4E1Z4 1266 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 FGBP02675 491 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 PFKMP08237 780 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 ACRP10323 421 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 EDNRBP24530 442 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 CDC37Q16543 378 aaPredicted RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 ZSCAN10Q96SZ4 725 aaPredicted RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 GAS2L1Q99501 681 aaPredicted RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 ZNF576Q9H609 170 aa11.84□□□□□ -0.51
VMP1-214ENST00000592106 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
VMP1-214ENST00000592106 IGHDP01880 384 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 GOLGA8HP0CJ92 632 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 CCL23P55773 120 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 PSMC6P62333 389 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 PURAQ00577 322 aaKnown RBP11.83□□□□□ -0.52
VMP1-214ENST00000592106 TRDNQ13061 729 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 TRAF1Q13077 416 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
VMP1-214ENST00000592106 RUFY2Q8WXA3 655 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 ANKS1AQ92625 1134 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
VMP1-214ENST00000592106 UBA5Q9GZZ9 404 aa11.83□□□□□ -0.52
VMP1-214ENST00000592106 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
VMP1-214ENST00000592106 LAMA3Q16787 3333 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 TXNP10599 105 aaKnown RBP11.82□□□□□ -0.52
VMP1-214ENST00000592106 ACTN1P12814 892 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 PTPN11Q06124 597 aaPredicted RBP11.82□□□□□ -0.52
VMP1-214ENST00000592106 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 FBXO11Q86XK2 927 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 CCDC155Q8N6L0 562 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 ENAHQ8N8S7 591 aaPredicted RBP11.82□□□□□ -0.52
VMP1-214ENST00000592106 NSUN6Q8TEA1 469 aaKnown RBP11.82□□□□□ -0.52
VMP1-214ENST00000592106 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 PBX4Q9BYU1 374 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 TRPV6Q9H1D0 765 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 GRIN2DO15399 1336 aa11.82□□□□□ -0.52
VMP1-214ENST00000592106 ERICH2A1L162 156 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 GH1P01241 217 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 PTGS1P23219 599 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 RFC2P35250 354 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 STXBP2Q15833 593 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 QRICH1Q2TAL8 776 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 C16orf59Q7L2K0 433 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 OTOP2Q7RTS6 562 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 RALYLQ86SE5 291 aaKnown RBP11.81□□□□□ -0.52
VMP1-214ENST00000592106 RETREG2Q8NC44 543 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 IWS1Q96ST2 819 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 AMNQ9BXJ7 453 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
VMP1-214ENST00000592106 SLC4A7Q9Y6M7 1214 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms