RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 MYMKA6NI61 221 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 FANCGO15287 622 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 CCNE1P24864 410 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 COBLL1Q53SF7 1204 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 RBM26Q5T8P6 1007 aaKnown RBP22.07■■□□□ 1.12
MBD3-209ENST00000592012 SNX29Q8TEQ0 813 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 P2RX5Q93086 422 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 CCDC51Q96ER9 411 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 NUP88Q99567 741 aaPredicted RBP22.07■■□□□ 1.12
MBD3-209ENST00000592012 COL2A1P02458 1487 aaPredicted RBP22.07■■□□□ 1.12
MBD3-209ENST00000592012 FECHP22830 423 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 UBXN1Q04323 297 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 CNNM4Q6P4Q7 775 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 GJA10Q969M2 543 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 DESI2Q9BSY9 194 aa22.07■■□□□ 1.12
MBD3-209ENST00000592012 RNF225M0QZC1 329 aaPredicted RBP22.06■■□□□ 1.12
MBD3-209ENST00000592012 MEIS2O14770 477 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 PPP1R2P41236 205 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 USP11P51784 963 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 GRIPAP1Q4V328 841 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 TMEM119Q4V9L6 283 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 ANKRD40Q6AI12 368 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 RSBN1LQ6PCB5 846 aaPredicted RBP22.06■■□□□ 1.12
MBD3-209ENST00000592012 RAD9BQ6WBX8 426 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 TTLL6Q8N841 843 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 KIAA0895Q8NCT3 520 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 NOC3LQ8WTT2 800 aaKnown RBP22.06■■□□□ 1.12
MBD3-209ENST00000592012 RAD54LQ92698 747 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 NAP1L4Q99733 375 aaKnown RBP22.06■■□□□ 1.12
MBD3-209ENST00000592012 PCDHA12Q9UN75 941 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 PSME4Q14997 1843 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 PVALEFA0A1B0GWK0 134 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 BICDL2A1A5D9 508 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 SPDYE2BA6NHP3 402 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 SLU7O95391 586 aaKnown RBP22.06■■□□□ 1.12
MBD3-209ENST00000592012 TPM1P09493 284 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 SPDYE6P0CI01 402 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 ECM1Q16610 540 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 CSGALNACT2Q8N6G5 542 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 ZNF507Q8TCN5 953 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 HPS3Q969F9 1004 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 ARFGEF1Q9Y6D6 1849 aa22.06■■□□□ 1.12
MBD3-209ENST00000592012 UNC13DQ70J99 1090 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 KCNK18Q7Z418 384 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 AMNQ9BXJ7 453 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 A0A1W2PRG0 241 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 LGALS16A8MUM7 142 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 TRIM14Q14142 442 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 RTKN2Q8IZC4 609 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 MB21D1Q8N884 522 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 ERO1AQ96HE7 468 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 GMLQ99445 158 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 ANO3Q9BYT9 981 aa22.05■■□□□ 1.12
MBD3-209ENST00000592012 HERC5Q9UII4 1024 aaKnown RBP22.05■■□□□ 1.12
MBD3-209ENST00000592012 CYP3A7-CYP3A51PA0A087WV96 503 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 VIL1P09327 827 aaKnown RBP22.04■■□□□ 1.12
MBD3-209ENST00000592012 CYP3A7P24462 503 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 SNAP25P60880 206 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 PSMD1Q99460 953 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 P2RX7Q99572 595 aaKnown RBP22.04■■□□□ 1.12
MBD3-209ENST00000592012 SLC39A2Q9NP94 309 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 ABHD10Q9NUJ1 306 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 ADGRG1Q9Y653 693 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 TCP10L2B9ZVM9 353 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 MARCH6O60337 910 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 RAD17O75943 681 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 CCDC175P0C221 793 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 BMP3P12645 472 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 SYDE2Q5VT97 1194 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 DYMQ7RTS9 669 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 CRYGNQ8WXF5 182 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 KCNMB3Q9NPA1 279 aa22.04■■□□□ 1.12
MBD3-209ENST00000592012 MAGEC2Q9UBF1 373 aaPredicted RBP22.04■■□□□ 1.12
MBD3-209ENST00000592012 A0A1W2PQC6 194 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 PSMD14O00487 310 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 AP3B2Q13367 1082 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 BTNL9Q6UXG8 535 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 EEF2KMTQ96G04 330 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 MBOAT7Q96N66 472 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.03■■□□□ 1.12
MBD3-209ENST00000592012 CENPPQ6IPU0 288 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 FBXO11Q86XK2 927 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 SEMA6BQ9H3T3 888 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 MRPL44Q9H9J2 332 aaKnown RBP22.03■■□□□ 1.12
MBD3-209ENST00000592012 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
MBD3-209ENST00000592012 CLRN2A0PK11 232 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 KCNA3P22001 575 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 HYIQ5T013 277 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 PDCL2Q8N4E4 241 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 DDX12PQ92771 950 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 TUBGCP2Q9BSJ2 902 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 LRRC27Q9C0I9 530 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 SYNPO2Q9UMS6 1093 aa22.02■■□□□ 1.12
MBD3-209ENST00000592012 IKQ13123 557 aaPredicted RBP22.02■■□□□ 1.11
MBD3-209ENST00000592012 MOXD1Q6UVY6 613 aa22.02■■□□□ 1.11
MBD3-209ENST00000592012 TMTC1Q8IUR5 882 aa22.02■■□□□ 1.11
MBD3-209ENST00000592012 LARGE2Q8N3Y3 721 aa22.02■■□□□ 1.11
MBD3-209ENST00000592012 ZNF277Q9NRM2 450 aaPredicted RBP22.02■■□□□ 1.11
MBD3-209ENST00000592012 ZNF70Q9UC06 446 aaPredicted RBP22.02■■□□□ 1.11
MBD3-209ENST00000592012 KRT9P35527 623 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms