RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.25■■□□□ 1.474e-7■■■■□ 22.1
CIRBP-229ENST00000590704 HMX1Q9NP08 348 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-229ENST00000590704 RIC8AQ9NPQ8 531 aa24.25■■□□□ 1.47
CIRBP-229ENST00000590704 STK36Q9NRP7 1315 aa24.25■■□□□ 1.47
CIRBP-229ENST00000590704 VPS54Q9P1Q0 977 aa24.25■■□□□ 1.47
CIRBP-229ENST00000590704 RBM27Q9P2N5 1060 aaKnown RBP24.25■■□□□ 1.47
CIRBP-229ENST00000590704 LOC102724159A0A0B4J2E5 919 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 SMCO2A6NFE2 343 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 DEXIO95424 95 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 NAPAP54920 295 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 PWP2Q15269 919 aaKnown RBP24.24■■□□□ 1.47
CIRBP-229ENST00000590704 PPP1R18Q6NYC8 613 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 PDCD2LQ9BRP1 358 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 RNF208Q9H0X6 261 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 PDGFCQ9NRA1 345 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 NRBP1Q9UHY1 535 aa24.24■■□□□ 1.47
CIRBP-229ENST00000590704 ESYT2A0FGR8 921 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 ASB14A6NK59 587 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 EDIL3O43854 480 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 RGS20O76081 388 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 GJB1P08034 283 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 ACVR2BQ13705 512 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 FCHSD1Q86WN1 690 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 CRISPLD2Q9H0B8 497 aa24.23■■□□□ 1.47
CIRBP-229ENST00000590704 ADD3Q9UEY8 706 aaKnown RBP24.23■■□□□ 1.47
CIRBP-229ENST00000590704 ST18O60284 1047 aa24.22■■□□□ 1.47
CIRBP-229ENST00000590704 PTGS1P23219 599 aa24.22■■□□□ 1.47
CIRBP-229ENST00000590704 MNX1P50219 401 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-229ENST00000590704 NSUN6Q8TEA1 469 aaKnown RBP24.22■■□□□ 1.47
CIRBP-229ENST00000590704 ABHD16BQ9H3Z7 469 aa24.22■■□□□ 1.47
CIRBP-229ENST00000590704 SH2B1Q9NRF2 756 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-229ENST00000590704 M0R2N6 131 aa24.21■■□□□ 1.47
CIRBP-229ENST00000590704 MRPS9P82933 396 aaKnown RBP24.21■■□□□ 1.47
CIRBP-229ENST00000590704 VSIG10LQ86VR7 867 aa24.21■■□□□ 1.47
CIRBP-229ENST00000590704 SH3GLB2Q9NR46 395 aa24.21■■□□□ 1.47
CIRBP-229ENST00000590704 TMEM260Q9NX78 707 aa24.21■■□□□ 1.47
CIRBP-229ENST00000590704 ORC3Q9UBD5 711 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-229ENST00000590704 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.2■■□□□ 1.47
CIRBP-229ENST00000590704 RBM47A0AV96 593 aaKnown RBP24.2■■□□□ 1.47
CIRBP-229ENST00000590704 SEPT4O43236 478 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 NR3C2P08235 984 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 EIF2AK2P19525 551 aaKnown RBP24.2■■□□□ 1.47
CIRBP-229ENST00000590704 GJA8P48165 433 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 PGM5Q15124 567 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 CPLX2Q6PUV4 134 aaKnown RBP24.2■■□□□ 1.47
CIRBP-229ENST00000590704 EEPD1Q7L9B9 569 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 TRIM22Q8IYM9 498 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 ZFP91Q96JP5 570 aaPredicted RBP24.2■■□□□ 1.47
CIRBP-229ENST00000590704 DEFB118Q96PH6 123 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 IWS1Q96ST2 819 aa24.2■■□□□ 1.47
CIRBP-229ENST00000590704 CDKL5O76039 1030 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 SGPL1O95470 568 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 EN2P19622 333 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 AKAP17AQ02040 695 aaKnown RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 CCDC144BQ3MJ40 725 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 FBXO16Q8IX29 292 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 CRYGNQ8WXF5 182 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 LENG1Q96BZ8 264 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 LLPHQ9BRT6 129 aaKnown RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 PCDHA6Q9UN73 950 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 PCDHA8Q9Y5H6 950 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 IRX5P78411 483 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 ANO1Q5XXA6 986 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 U2AF1L4Q8WU68 220 aaKnown RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 CUL5Q93034 780 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 PGBD1Q96JS3 809 aa24.19■■□□□ 1.46
CIRBP-229ENST00000590704 DDX20Q9UHI6 824 aaKnown RBP24.19■■□□□ 1.46
CIRBP-229ENST00000590704 ADCY7P51828 1080 aa24.18■■□□□ 1.46
CIRBP-229ENST00000590704 MRPL12P52815 198 aaKnown RBP24.18■■□□□ 1.46
CIRBP-229ENST00000590704 ARHGEF16Q5VV41 709 aa24.18■■□□□ 1.46
CIRBP-229ENST00000590704 RASGRP4Q8TDF6 673 aa24.18■■□□□ 1.46
CIRBP-229ENST00000590704 PHF20Q9BVI0 1012 aa24.18■■□□□ 1.46
CIRBP-229ENST00000590704 OGDHLQ9ULD0 1010 aa24.18■■□□□ 1.46
CIRBP-229ENST00000590704 KCNJ14Q9UNX9 436 aa24.18■■□□□ 1.46
CIRBP-229ENST00000590704 GNEQ9Y223 722 aaKnown RBP24.18■■□□□ 1.46
CIRBP-229ENST00000590704 FRMPD3Q5JV73 1810 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 ARIH2O95376 493 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 ADCYAP1R1P41586 468 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 MCM2P49736 904 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 SOX10P56693 466 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 CUL4AQ13619 759 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 CCDC62Q6P9F0 684 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 TEX2Q8IWB9 1127 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 VTA1Q9NP79 307 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 CNPY2Q9Y2B0 182 aa24.17■■□□□ 1.46
CIRBP-229ENST00000590704 KIAA1217Q5T5P2 1943 aa24.16■■□□□ 1.46
CIRBP-229ENST00000590704 CTAGE5O15320 804 aa24.16■■□□□ 1.46
CIRBP-229ENST00000590704 UBE2Q1Q7Z7E8 422 aa24.16■■□□□ 1.46
CIRBP-229ENST00000590704 ALG1Q9BT22 464 aa24.16■■□□□ 1.46
CIRBP-229ENST00000590704 ZHX1Q9UKY1 873 aaPredicted RBP24.16■■□□□ 1.46
CIRBP-229ENST00000590704 SMPD1P17405 629 aa24.15■■□□□ 1.46
CIRBP-229ENST00000590704 CNGA1P29973 690 aa24.15■■□□□ 1.46
CIRBP-229ENST00000590704 SEMA3FQ13275 785 aa24.15■■□□□ 1.46
CIRBP-229ENST00000590704 GJC2Q5T442 439 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-229ENST00000590704 DAGLBQ8NCG7 672 aa24.15■■□□□ 1.46
CIRBP-229ENST00000590704 EIF3JO75822 258 aaKnown RBP24.14■■□□□ 1.46
CIRBP-229ENST00000590704 PDE4DQ08499 809 aa24.14■■□□□ 1.46
CIRBP-229ENST00000590704 STXBP2Q15833 593 aa24.14■■□□□ 1.46
CIRBP-229ENST00000590704 JAKMIP3Q5VZ66 844 aa24.14■■□□□ 1.46
CIRBP-229ENST00000590704 OXER1Q8TDS5 423 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms