RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 UMODL1Q5DID0 1318 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 MYO9BQ13459 2157 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 KPNA6O60684 536 aa20.95■□□□□ 0.94
PRKCSH-211ENST00000590098 TXNP10599 105 aaKnown RBP20.95■□□□□ 0.94
PRKCSH-211ENST00000590098 MCF2L2Q86YR7 1114 aa20.95■□□□□ 0.94
PRKCSH-211ENST00000590098 RPUSD2Q8IZ73 545 aaKnown RBP20.95■□□□□ 0.94
PRKCSH-211ENST00000590098 HERVK_113Q902F9 699 aa20.95■□□□□ 0.94
PRKCSH-211ENST00000590098 VAT1LQ9HCJ6 419 aa20.95■□□□□ 0.94
PRKCSH-211ENST00000590098 PBX2P40425 430 aa20.94■□□□□ 0.94
PRKCSH-211ENST00000590098 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
PRKCSH-211ENST00000590098 IFIT1BQ5T764 474 aaKnown RBP20.94■□□□□ 0.94
PRKCSH-211ENST00000590098 FBXO11Q86XK2 927 aa20.94■□□□□ 0.94
PRKCSH-211ENST00000590098 TRMT13Q9NUP7 481 aaKnown RBP20.94■□□□□ 0.94
PRKCSH-211ENST00000590098 MRPL11Q9Y3B7 192 aaKnown RBP20.94■□□□□ 0.94
PRKCSH-211ENST00000590098 QRICH1Q2TAL8 776 aa20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 FAM47CQ5HY64 1035 aa20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 NSUN6Q8TEA1 469 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 TBC1D5Q92609 795 aa20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 COPS5Q92905 334 aa20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 PBX4Q9BYU1 374 aa20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 MSRAQ9UJ68 235 aa20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 SUPT16HQ9Y5B9 1047 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-211ENST00000590098 SCN10AQ9Y5Y9 1956 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 A6NJR5 290 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 TRDNQ13061 729 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 RAB30Q15771 203 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 NBPF20Q3BBV1 942 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 TTC22Q5TAA0 569 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 OTOP2Q7RTS6 562 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 SYTL5Q8TDW5 730 aaPredicted RBP20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 VWCEQ96DN2 955 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 TAAR1Q96RJ0 339 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 WNT8AQ9H1J5 351 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 JMJD4Q9H9V9 463 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 CXXC1Q9P0U4 656 aaPredicted RBP20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 CHD9Q3L8U1 2897 aa20.92■□□□□ 0.94
PRKCSH-211ENST00000590098 CYP2C9P11712 490 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 VCANP13611 3396 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 PDE4AP27815 886 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 STXBP2Q15833 593 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 KIAA1217Q5T5P2 1943 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 NFRKBQ6P4R8 1299 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 RUFY2Q8WXA3 655 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 SCLYQ96I15 445 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 IWS1Q96ST2 819 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 RMDN3Q96TC7 470 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 IL25Q9H293 177 aa20.91■□□□□ 0.94
PRKCSH-211ENST00000590098 ARIH2O95376 493 aa20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 GSPT1P15170 499 aaKnown RBP20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 ARHGEF16Q5VV41 709 aa20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 SEPT14Q6ZU15 432 aa20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 PPP1R13LQ8WUF5 828 aa20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 GAS2L1Q99501 681 aaPredicted RBP20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 AMNQ9BXJ7 453 aa20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 GBF1Q92538 1859 aa20.9■□□□□ 0.94
PRKCSH-211ENST00000590098 KLRF2D3W0D1 207 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 CFBP00751 764 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 CHMP4BP1P59074 171 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 PTPN11Q06124 597 aaPredicted RBP20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 CCDC62Q6P9F0 684 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 STAG2Q8N3U4 1231 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 COL20A1Q9P218 1284 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 SLC4A7Q9Y6M7 1214 aa20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
PRKCSH-211ENST00000590098 ZBBXA8MT70 800 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 GH1P01241 217 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 PFKMP08237 780 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 EIF2AK2P19525 551 aaKnown RBP20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 SEC23AQ15436 765 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 LY6KQ17RY6 165 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 CYB5R4Q7L1T6 521 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 USP38Q8NB14 1042 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 RETREG2Q8NC44 543 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 AFG1LQ8WV93 481 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 SLC28A3Q9HAS3 691 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 NOD1Q9Y239 953 aa20.88■□□□□ 0.93
PRKCSH-211ENST00000590098 ERICH2A1L162 156 aa20.87■□□□□ 0.93
PRKCSH-211ENST00000590098 EIF3JO75822 258 aaKnown RBP20.87■□□□□ 0.93
PRKCSH-211ENST00000590098 CHST3Q7LGC8 479 aa20.87■□□□□ 0.93
PRKCSH-211ENST00000590098 DEFB128Q7Z7B8 93 aa20.87■□□□□ 0.93
PRKCSH-211ENST00000590098 SCN5AQ14524 2016 aa20.87■□□□□ 0.93
PRKCSH-211ENST00000590098 ZBTB5O15062 677 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 MMP3P08254 477 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 ACTN1P12814 892 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 CHMLP26374 656 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 RFC2P35250 354 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 ARHGAP1Q07960 439 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 TRAF1Q13077 416 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 BFSP2Q13515 415 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 RALYLQ86SE5 291 aaKnown RBP20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 NKX2-4Q9H2Z4 354 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 PRDM12Q9H4Q4 367 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 PXMP2Q9NR77 195 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 MAD2L2Q9UI95 211 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 PCDHA1Q9Y5I3 950 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 MYH7BA7E2Y1 1941 aa20.86■□□□□ 0.93
PRKCSH-211ENST00000590098 BAZ2BQ9UIF8 2168 aaKnown RBP20.85■□□□□ 0.93
PRKCSH-211ENST00000590098 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
PRKCSH-211ENST00000590098 PITPNM1O00562 1244 aa20.85■□□□□ 0.93
PRKCSH-211ENST00000590098 IFIT3O14879 490 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms