RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	LHX8	Q68G74	356 aa		28.76	■■■□□ 2.19
CIRBP-223	ENST00000589266	SNRNP48	Q6IEG0	339 aa	Known RBP	28.76	■■■□□ 2.19
CIRBP-223	ENST00000589266	TYW1B	Q6NUM6	668 aa		28.76	■■■□□ 2.19
CIRBP-223	ENST00000589266	SHCBP1	Q8NEM2	672 aa		28.76	■■■□□ 2.19
CIRBP-223	ENST00000589266	C6orf50	Q9HD87	102 aa		28.76	■■■□□ 2.19
CIRBP-223	ENST00000589266		H3BQV1	296 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	STX6	O43752	255 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	PEX10	O60683	326 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	RGS2	P41220	211 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	ERVK-9	P63128	1117 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	ERVK-24	P63145	666 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	CCNA1	P78396	465 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	USH1G	Q495M9	461 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	DAGLB	Q8NCG7	672 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	CHST13	Q8NET6	341 aa		28.75	■■■□□ 2.19
CIRBP-223	ENST00000589266	MMP1	P03956	469 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	CCND3	P30281	292 aa	Predicted RBP	28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	MRPL12	P52815	198 aa	Known RBP	28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	NLRP5	P59047	1200 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	SAFB	Q15424	915 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	MCF2L2	Q86YR7	1114 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	BICD2	Q8TD16	824 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	USP6NL	Q92738	828 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	PAGR1	Q9BTK6	254 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	BRMS1	Q9HCU9	246 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	MAP3K20	Q9NYL2	800 aa	Known RBP	28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	FBXO40	Q9UH90	709 aa		28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	LAMA2	P24043	3122 aa	Known RBP	28.74	■■■□□ 2.19
CIRBP-223	ENST00000589266	SMCO2	A6NFE2	343 aa		28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	ALAS1	P13196	640 aa		28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	NUCB2	P80303	420 aa		28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	GHRHR	Q02643	423 aa		28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	RIC8A	Q9NPQ8	531 aa		28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	PCDHA4	Q9UN74	947 aa		28.73	■■■□□ 2.19
CIRBP-223	ENST00000589266	ADCY7	P51828	1080 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	PLS1	Q14651	629 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266		Q3C1V9	767 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	MCTP2	Q6DN12	878 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	GPR142	Q7Z601	462 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	CUL5	Q93034	780 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	GUCD1	Q96NT3	240 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	TRERF1	Q96PN7	1200 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	LBHD1	Q9BQE6	289 aa	Predicted RBP	28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	MOV10L1	Q9BXT6	1211 aa	Known RBP	28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	MROH8	Q9H579	483 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	PSTPIP2	Q9H939	334 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	RNF146	Q9NTX7	359 aa		28.72	■■■□□ 2.19
CIRBP-223	ENST00000589266	DNAH12	Q6ZR08	3092 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	PIK3CD	O00329	1044 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	CCL14	Q16627	93 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	MORN1	Q5T089	497 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	PLEKHH3	Q7Z736	793 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	CLEC4D	Q8WXI8	215 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	PORCN	Q9H237	461 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	ACAD9	Q9H845	621 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	GJB4	Q9NTQ9	266 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	KCNJ14	Q9UNX9	436 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	MTMR6	Q9Y217	621 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	RIPK3	Q9Y572	518 aa		28.71	■■■□□ 2.19
CIRBP-223	ENST00000589266	SMCHD1	A6NHR9	2005 aa		28.7	■■■□□ 2.19
CIRBP-223	ENST00000589266	NPY5R	Q15761	445 aa		28.7	■■■□□ 2.18
CIRBP-223	ENST00000589266	APBA2	Q99767	749 aa		28.7	■■■□□ 2.18
CIRBP-223	ENST00000589266	OPLAH	O14841	1288 aa		28.69	■■■□□ 2.18
CIRBP-223	ENST00000589266	KRT2	P35908	639 aa		28.69	■■■□□ 2.18
CIRBP-223	ENST00000589266	BLID	Q8IZY5	108 aa		28.69	■■■□□ 2.18
CIRBP-223	ENST00000589266	FOXP1	Q9H334	677 aa	Predicted RBP	28.69	■■■□□ 2.18
CIRBP-223	ENST00000589266	VPS37C	A5D8V6	355 aa	Predicted RBP	28.68	■■■□□ 2.18
CIRBP-223	ENST00000589266	GUCY1B3	Q02153	619 aa		28.68	■■■□□ 2.18
CIRBP-223	ENST00000589266	DIS3L2	Q8IYB7	885 aa	Known RBP	28.68	■■■□□ 2.18
CIRBP-223	ENST00000589266	FAM161B	Q96MY7	647 aa		28.68	■■■□□ 2.18
CIRBP-223	ENST00000589266	SENP6	Q9GZR1	1112 aa	Predicted RBP	28.68	■■■□□ 2.18
CIRBP-223	ENST00000589266	GCOM1	H8Y6P7	765 aa	Predicted RBP	28.67	■■■□□ 2.18
CIRBP-223	ENST00000589266	BRD1	O95696	1058 aa		28.67	■■■□□ 2.18
CIRBP-223	ENST00000589266	POLR2M	P0CAP2	368 aa		28.67	■■■□□ 2.18
CIRBP-223	ENST00000589266	ERCC3	P19447	782 aa		28.67	■■■□□ 2.18
CIRBP-223	ENST00000589266	FOSB	P53539	338 aa		28.67	■■■□□ 2.18
CIRBP-223	ENST00000589266	CHMP5	Q9NZZ3	219 aa		28.67	■■■□□ 2.18
CIRBP-223	ENST00000589266		M0R2N6	131 aa		28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	ZSCAN22	P10073	491 aa	Predicted RBP	28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	U2AF2	P26368	475 aa	Known RBP eCLIP	28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	HSD17B4	P51659	736 aa		28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	MUM1L1	Q5H9M0	696 aa		28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	ZNF697	Q5TEC3	545 aa		28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	NCAPG2	Q86XI2	1143 aa		28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	REXO1	Q8N1G1	1221 aa	Known RBP	28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	HOMER2	Q9NSB8	354 aa		28.66	■■■□□ 2.18
CIRBP-223	ENST00000589266	NFIB	O00712	420 aa		28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	MEIS2	O14770	477 aa		28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	FOS	P01100	380 aa	Predicted RBP	28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	TAL1	P17542	331 aa	Predicted RBP	28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	CLK2	P49760	499 aa	Known RBP	28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	MAP2K5	Q13163	448 aa		28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	AP3B2	Q13367	1082 aa		28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	MFSD14C	Q5VZR4	134 aa		28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	PRKAG2	Q9UGJ0	569 aa		28.65	■■■□□ 2.18
CIRBP-223	ENST00000589266	RNF207	Q6ZRF8	634 aa		28.64	■■■□□ 2.18
CIRBP-223	ENST00000589266	BRAP	Q7Z569	592 aa		28.64	■■■□□ 2.18
CIRBP-223	ENST00000589266	VCAN	P13611	3396 aa		28.63	■■■□□ 2.17

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