RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
TUBD1-209ENST00000588706 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
TUBD1-209ENST00000588706 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
TUBD1-209ENST00000588706 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
TUBD1-209ENST00000588706 LRRC37AA6NMS7 1700 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 TAF1P21675 1872 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 CDK5RAP2Q96SN8 1893 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 BICDL2A1A5D9 508 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 BBOX1O75936 387 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 TSPY3P0CV98 308 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 TSPY8P0CW00 308 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 EEF1GP26641 437 aaKnown RBP11.66□□□□□ -0.54
TUBD1-209ENST00000588706 RFC4P35249 363 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 DYNLL1P63167 89 aaKnown RBP11.66□□□□□ -0.54
TUBD1-209ENST00000588706 ST5P78524 1137 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 PAK1Q13153 545 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 COBLL1Q53SF7 1204 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 DTHD1Q6ZMT9 781 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
TUBD1-209ENST00000588706 CNBD1Q8NA66 436 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 ERCC4Q92889 916 aaPredicted RBP11.66□□□□□ -0.54
TUBD1-209ENST00000588706 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
TUBD1-209ENST00000588706 KLF16Q9BXK1 252 aaPredicted RBP11.66□□□□□ -0.54
TUBD1-209ENST00000588706 RAB34Q9BZG1 259 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 C6orf50Q9HD87 102 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 PPP2R2CQ9Y2T4 447 aa11.66□□□□□ -0.54
TUBD1-209ENST00000588706 A0A1W2PQC6 194 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 SNAP23O00161 211 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 PLEKHA8P1O95397 391 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
TUBD1-209ENST00000588706 IL1R1P14778 569 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 BMP6P22004 513 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 TFAP4Q01664 338 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
TUBD1-209ENST00000588706 NPY5RQ15761 445 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 WWC2Q6AWC2 1192 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 MCTP2Q6DN12 878 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 UBXN4Q92575 508 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 NUP58Q9BVL2 599 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 INCENPQ9NQS7 918 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
TUBD1-209ENST00000588706 BARHL2Q9NY43 387 aa11.65□□□□□ -0.54
TUBD1-209ENST00000588706 ADD3Q9UEY8 706 aaKnown RBP11.65□□□□□ -0.54
TUBD1-209ENST00000588706 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
TUBD1-209ENST00000588706 MYH8P13535 1937 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ABCB11O95342 1321 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 PALM3A6NDB9 673 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-209ENST00000588706 PSMA7O14818 248 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 TM4SF1P30408 202 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 CASQ1P31415 396 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 SOX11P35716 441 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 PBX1P40424 430 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 STAT6P42226 847 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 NOVP48745 357 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 CRY2Q49AN0 593 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 SLC27A3Q5K4L6 730 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 SOGA3Q5TF21 947 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 SYT10Q6XYQ8 523 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 TMEM139Q8IV31 216 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 KRT222Q8N1A0 295 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 TC2NQ8N9U0 490 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 RPGRQ92834 1020 aaKnown RBP11.64□□□□□ -0.55
TUBD1-209ENST00000588706 DHTKD1Q96HY7 919 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-209ENST00000588706 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ZMYND12Q9H0C1 365 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ATP13A2Q9NQ11 1180 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 DISC1Q9NRI5 854 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ZNHIT6Q9NWK9 470 aaKnown RBP11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
TUBD1-209ENST00000588706 SEC63Q9UGP8 760 aaKnown RBP11.64□□□□□ -0.55
TUBD1-209ENST00000588706 ZNF215Q9UL58 517 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-209ENST00000588706 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 GAKO14976 1311 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 FAM205AQ6ZU69 1335 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 M0R2N6 131 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 ERVH48-1M5A8F1 160 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 KCNQ2O43526 872 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 KIF5CO60282 957 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 PRDX5P30044 214 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 UBA7P41226 1012 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 SEPT2Q15019 361 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 ASPRV1Q53RT3 343 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 RCSD1Q6JBY9 416 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
TUBD1-209ENST00000588706 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms