RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
TUBD1-209ENST00000588706 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
TUBD1-209ENST00000588706 PHF23Q9BUL5 403 aaPredicted RBP26.78■■□□□ 1.88
TUBD1-209ENST00000588706 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.86
TUBD1-209ENST00000588706 PLPPR3Q6T4P5 718 aa24.79■■□□□ 1.56
TUBD1-209ENST00000588706 FOXD1Q16676 465 aa24.68■■□□□ 1.54
TUBD1-209ENST00000588706 ADRA2BP18089 450 aa23.66■■□□□ 1.38
TUBD1-209ENST00000588706 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
TUBD1-209ENST00000588706 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
TUBD1-209ENST00000588706 MSH5O43196 834 aa22.86■■□□□ 1.25
TUBD1-209ENST00000588706 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
TUBD1-209ENST00000588706 PPP4R3CPQ6ZMV5 832 aa21.81■■□□□ 1.08
TUBD1-209ENST00000588706 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
TUBD1-209ENST00000588706 MAPK8IP2Q13387 824 aaPredicted RBP21.47■■□□□ 1.03
TUBD1-209ENST00000588706 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
TUBD1-209ENST00000588706 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
TUBD1-209ENST00000588706 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
TUBD1-209ENST00000588706 KCNA4P22459 653 aa21.2■□□□□ 0.98
TUBD1-209ENST00000588706 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
TUBD1-209ENST00000588706 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
TUBD1-209ENST00000588706 RNF216Q9NWF9 866 aaPredicted RBP20.82■□□□□ 0.92
TUBD1-209ENST00000588706 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
TUBD1-209ENST00000588706 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
TUBD1-209ENST00000588706 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
TUBD1-209ENST00000588706 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
TUBD1-209ENST00000588706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
TUBD1-209ENST00000588706 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
TUBD1-209ENST00000588706 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
TUBD1-209ENST00000588706 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
TUBD1-209ENST00000588706 RNF39Q9H2S5 420 aa19.52■□□□□ 0.72
TUBD1-209ENST00000588706 ZBTB22O15209 634 aa19.46■□□□□ 0.71
TUBD1-209ENST00000588706 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
TUBD1-209ENST00000588706 MYCNP04198 464 aaPredicted RBP19.36■□□□□ 0.69
TUBD1-209ENST00000588706 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
TUBD1-209ENST00000588706 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
TUBD1-209ENST00000588706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
TUBD1-209ENST00000588706 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
TUBD1-209ENST00000588706 SAMD1Q6SPF0 538 aaPredicted RBP19.16■□□□□ 0.66
TUBD1-209ENST00000588706 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
TUBD1-209ENST00000588706 APLP2Q06481 763 aa19.1■□□□□ 0.65
TUBD1-209ENST00000588706 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
TUBD1-209ENST00000588706 CAPN15O75808 1086 aa18.92■□□□□ 0.62
TUBD1-209ENST00000588706 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
TUBD1-209ENST00000588706 ATXN8OSP0DMR3 200 aa18.88■□□□□ 0.61
TUBD1-209ENST00000588706 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
TUBD1-209ENST00000588706 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
TUBD1-209ENST00000588706 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
TUBD1-209ENST00000588706 DSG3P32926 999 aa18.56■□□□□ 0.56
TUBD1-209ENST00000588706 ABCB7O75027 752 aa18.53■□□□□ 0.56
TUBD1-209ENST00000588706 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
TUBD1-209ENST00000588706 POLA2Q14181 598 aa18.44■□□□□ 0.54
TUBD1-209ENST00000588706 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
TUBD1-209ENST00000588706 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
TUBD1-209ENST00000588706 FBLN2P98095 1184 aa18.09■□□□□ 0.49
TUBD1-209ENST00000588706 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
TUBD1-209ENST00000588706 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
TUBD1-209ENST00000588706 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
TUBD1-209ENST00000588706 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
TUBD1-209ENST00000588706 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
TUBD1-209ENST00000588706 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
TUBD1-209ENST00000588706 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
TUBD1-209ENST00000588706 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
TUBD1-209ENST00000588706 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
TUBD1-209ENST00000588706 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
TUBD1-209ENST00000588706 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
TUBD1-209ENST00000588706 DCAF8L2P0C7V8 631 aa17.54■□□□□ 0.4
TUBD1-209ENST00000588706 FKBP8Q14318 412 aa17.52■□□□□ 0.4
TUBD1-209ENST00000588706 NACADO15069 1562 aa17.51■□□□□ 0.39
TUBD1-209ENST00000588706 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
TUBD1-209ENST00000588706 SSUH2Q9Y2M2 353 aa17.48■□□□□ 0.39
TUBD1-209ENST00000588706 ABCC9O60706 1549 aa17.47■□□□□ 0.39
TUBD1-209ENST00000588706 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
TUBD1-209ENST00000588706 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
TUBD1-209ENST00000588706 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
TUBD1-209ENST00000588706 PROM2Q8N271 834 aa17.2■□□□□ 0.34
TUBD1-209ENST00000588706 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
TUBD1-209ENST00000588706 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
TUBD1-209ENST00000588706 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
TUBD1-209ENST00000588706 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
TUBD1-209ENST00000588706 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
TUBD1-209ENST00000588706 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
TUBD1-209ENST00000588706 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
TUBD1-209ENST00000588706 FBXO3Q9UK99 471 aa16.95■□□□□ 0.3
TUBD1-209ENST00000588706 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
TUBD1-209ENST00000588706 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
TUBD1-209ENST00000588706 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
TUBD1-209ENST00000588706 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.28
TUBD1-209ENST00000588706 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
TUBD1-209ENST00000588706 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
TUBD1-209ENST00000588706 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
TUBD1-209ENST00000588706 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
TUBD1-209ENST00000588706 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
TUBD1-209ENST00000588706 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
TUBD1-209ENST00000588706 WIZO95785 1651 aa16.69■□□□□ 0.26
TUBD1-209ENST00000588706 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
TUBD1-209ENST00000588706 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
TUBD1-209ENST00000588706 MIER1Q8N108 512 aa16.69■□□□□ 0.26
TUBD1-209ENST00000588706 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
TUBD1-209ENST00000588706 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
TUBD1-209ENST00000588706 CREBZFQ9NS37 354 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms