RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 NFRKBQ6P4R8 1299 aa21.65■■□□□ 1.06
CCDC43-204ENST00000588687 SCFD2Q8WU76 684 aa21.65■■□□□ 1.06
CCDC43-204ENST00000588687 CTAGE1Q96RT6 745 aa21.65■■□□□ 1.06
CCDC43-204ENST00000588687 CPVLQ9H3G5 476 aa21.65■■□□□ 1.06
CCDC43-204ENST00000588687 IGFBP4P22692 258 aa21.64■■□□□ 1.05
CCDC43-204ENST00000588687 PDE4DQ08499 809 aa21.64■■□□□ 1.05
CCDC43-204ENST00000588687 CCDC62Q6P9F0 684 aa21.64■■□□□ 1.05
CCDC43-204ENST00000588687 RAD50Q92878 1312 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 ZBBXA8MT70 800 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 ARHGEF15O94989 841 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 GOLGA8HP0CJ92 632 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 GPATCH4Q5T3I0 446 aaKnown RBP21.63■■□□□ 1.05
CCDC43-204ENST00000588687 DEFB128Q7Z7B8 93 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 RGS22Q8NE09 1264 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 ADAMTS19Q8TE59 1207 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 COL20A1Q9P218 1284 aa21.63■■□□□ 1.05
CCDC43-204ENST00000588687 TRIP12Q14669 1992 aaPredicted RBP21.62■■□□□ 1.05
CCDC43-204ENST00000588687 CA3P07451 260 aa21.62■■□□□ 1.05
CCDC43-204ENST00000588687 IQCF3P0C7M6 154 aa21.62■■□□□ 1.05
CCDC43-204ENST00000588687 RFC2P35250 354 aa21.62■■□□□ 1.05
CCDC43-204ENST00000588687 MRPS5P82675 430 aaKnown RBP21.62■■□□□ 1.05
CCDC43-204ENST00000588687 PTPN11Q06124 597 aaPredicted RBP21.62■■□□□ 1.05
CCDC43-204ENST00000588687 MFSD6Q6ZSS7 791 aa21.62■■□□□ 1.05
CCDC43-204ENST00000588687 MYH6P13533 1939 aa21.62■■□□□ 1.05
CCDC43-204ENST00000588687 EPOPA6NHQ4 379 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 KPNA6O60684 536 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 TXNP10599 105 aaKnown RBP21.61■■□□□ 1.05
CCDC43-204ENST00000588687 USH1GQ495M9 461 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 FAM47CQ5HY64 1035 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 DGKHQ86XP1 1220 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 TBC1D5Q92609 795 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 ZKSCAN3Q9BRR0 538 aa21.61■■□□□ 1.05
CCDC43-204ENST00000588687 GPHNQ9NQX3 736 aaPredicted RBP21.61■■□□□ 1.05
CCDC43-204ENST00000588687 POU3F3P20264 500 aaPredicted RBP21.6■■□□□ 1.05
CCDC43-204ENST00000588687 ARHGAP1Q07960 439 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 GPNMBQ14956 572 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 CDC37Q16543 378 aaPredicted RBP21.6■■□□□ 1.05
CCDC43-204ENST00000588687 ESR2Q92731 530 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 SLC9A7Q96T83 725 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 LNPKQ9C0E8 428 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 UBA5Q9GZZ9 404 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 MAF1Q9H063 256 aa21.6■■□□□ 1.05
CCDC43-204ENST00000588687 RNF41Q9H4P4 317 aaPredicted RBP21.6■■□□□ 1.05
CCDC43-204ENST00000588687 ZBTB47Q9UFB7 747 aaPredicted RBP21.6■■□□□ 1.05
CCDC43-204ENST00000588687 MMP3P08254 477 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 SDSP20132 328 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
CCDC43-204ENST00000588687 TMEM67Q5HYA8 995 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 SESTD1Q86VW0 696 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 SMC5Q8IY18 1101 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 PNMA1Q8ND90 353 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 SYTL5Q8TDW5 730 aaPredicted RBP21.59■■□□□ 1.05
CCDC43-204ENST00000588687 ANKS1AQ92625 1134 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 KAT2BQ92831 832 aa21.59■■□□□ 1.05
CCDC43-204ENST00000588687 UHRF1Q96T88 793 aaPredicted RBP21.59■■□□□ 1.05
CCDC43-204ENST00000588687 MPHOSPH6Q99547 160 aaKnown RBP21.59■■□□□ 1.05
CCDC43-204ENST00000588687 TCF20Q9UGU0 1960 aaKnown RBP21.58■■□□□ 1.05
CCDC43-204ENST00000588687 RFXAPO00287 272 aa21.58■■□□□ 1.05
CCDC43-204ENST00000588687 RBL2Q08999 1139 aa21.58■■□□□ 1.05
CCDC43-204ENST00000588687 PHOSPHO2Q8TCD6 241 aa21.58■■□□□ 1.05
CCDC43-204ENST00000588687 AFG1LQ8WV93 481 aa21.58■■□□□ 1.05
CCDC43-204ENST00000588687 DHX38Q92620 1227 aaKnown RBP21.58■■□□□ 1.05
CCDC43-204ENST00000588687 MTCH2Q9Y6C9 303 aa21.58■■□□□ 1.05
CCDC43-204ENST00000588687 ABCB11O95342 1321 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 TRIM6-TRIM34B2RNG4 842 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 KDM4AO75164 1064 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 ACTN1P12814 892 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 NT5C2P49902 561 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 TFF2Q03403 129 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 TAP1Q03518 808 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 GDF6Q6KF10 455 aaPredicted RBP21.57■■□□□ 1.04
CCDC43-204ENST00000588687 SPRED2Q7Z698 418 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 HERC6Q8IVU3 1022 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 ADGRF4Q8IZF3 695 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 TAAR1Q96RJ0 339 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 OSBPL3Q9H4L5 887 aa21.57■■□□□ 1.04
CCDC43-204ENST00000588687 OPLAHO14841 1288 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 BMP1P13497 986 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 BFSP2Q13515 415 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 LY6KQ17RY6 165 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 QRICH1Q2TAL8 776 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 PLEKHM2Q8IWE5 1019 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 ENAHQ8N8S7 591 aaPredicted RBP21.56■■□□□ 1.04
CCDC43-204ENST00000588687 RILPL2Q969X0 211 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 BRWD1Q9NSI6 2320 aa21.56■■□□□ 1.04
CCDC43-204ENST00000588687 B4DLN1 442 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 RBAK-RBAKDNI3L0D1 243 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 BAIAP3O94812 1187 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 MRPL12P52815 198 aaKnown RBP21.55■■□□□ 1.04
CCDC43-204ENST00000588687 GHRHRQ02643 423 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 PTGISQ16647 500 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 ASPRV1Q53RT3 343 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 KRT40Q6A162 431 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 MICALL1Q8N3F8 863 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 CAGE1Q8TC20 777 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 NSUN6Q8TEA1 469 aaKnown RBP21.55■■□□□ 1.04
CCDC43-204ENST00000588687 AFAP1L1Q8TED9 768 aa21.55■■□□□ 1.04
CCDC43-204ENST00000588687 EMID1Q96A84 441 aaPredicted RBP21.55■■□□□ 1.04
CCDC43-204ENST00000588687 NECAB3Q96P71 396 aaPredicted RBP21.55■■□□□ 1.04
CCDC43-204ENST00000588687 CERS4Q9HA82 394 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms