RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 FAM229AH3BQW9 127 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 DYNC1LI2O43237 492 aaPredicted RBP9.85□□□□□ -0.83
VMP1-208ENST00000588617 ALX3O95076 343 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 CBX7O95931 251 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 EOMESO95936 686 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 CELA2BP08218 269 aaPredicted RBP9.85□□□□□ -0.83
VMP1-208ENST00000588617 LCP1P13796 627 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 PLS3P13797 630 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 IFNGR1P15260 489 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 CTSKP43235 329 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 RECQLP46063 649 aaPredicted RBP9.85□□□□□ -0.83
VMP1-208ENST00000588617 CLEC16AQ2KHT3 1053 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 MINDY4Q4G0A6 757 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 FAM47CQ5HY64 1035 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 PGM2L1Q6PCE3 622 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 TMEM130Q8N3G9 435 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 CPA6Q8N4T0 437 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 DIO2Q92813 273 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 TRIM11Q96F44 468 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 IL17RAQ96F46 866 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 PLVAPQ9BX97 442 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 TCF7L1Q9HCS4 588 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 PRDM11Q9NQV5 511 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 CLEC1BQ9P126 229 aa9.85□□□□□ -0.83
VMP1-208ENST00000588617 PNMA8BQ9ULN7 279 aaPredicted RBP9.85□□□□□ -0.83
VMP1-208ENST00000588617 HOXB4P17483 251 aaPredicted RBP9.84□□□□□ -0.83
VMP1-208ENST00000588617 GSK3AP49840 483 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 SESN3P58005 492 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 KCNAB2Q13303 367 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 CDK5R2Q13319 367 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 TESK1Q15569 626 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 LYPD4Q6UWN0 246 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 KSR1Q8IVT5 923 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 CCDC103Q8IW40 242 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 CLRN3Q8NCR9 226 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 FAXDC2Q96IV6 333 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 COX4I2Q96KJ9 171 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 Q96M66 194 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 FCRL3Q96P31 734 aaPredicted RBP9.84□□□□□ -0.83
VMP1-208ENST00000588617 ADAMTS8Q9UP79 889 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 GIT1Q9Y2X7 761 aa9.84□□□□□ -0.83
VMP1-208ENST00000588617 CCDC66A2RUB6 948 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 ARHGEF15O94989 841 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 NBPF7P0C2Y1 421 aaPredicted RBP9.83□□□□□ -0.84
VMP1-208ENST00000588617 ELNP15502 786 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 MECP2P51608 486 aaKnown RBP9.83□□□□□ -0.84
VMP1-208ENST00000588617 ST5P78524 1137 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 PURAQ00577 322 aaKnown RBP9.83□□□□□ -0.84
VMP1-208ENST00000588617 KIZQ2M2Z5 673 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 LONRF3Q496Y0 759 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 SFRP5Q5T4F7 317 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 OVCH1Q7RTY7 1134 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 C2orf69Q8N8R5 385 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 USP33Q8TEY7 942 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 SLC5A5Q92911 643 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 FBXW5Q969U6 566 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 TIFAQ96CG3 184 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 CLIP3Q96DZ5 547 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 ARPC5LQ9BPX5 153 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 CEP41Q9BYV8 373 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 PRDM16Q9HAZ2 1276 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 ENAMQ9NRM1 1142 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 C14orf119Q9NWQ9 140 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 ZBTB21Q9ULJ3 1066 aa9.83□□□□□ -0.84
VMP1-208ENST00000588617 FZD9O00144 591 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 GSTA4O15217 222 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 CFBP00751 764 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 SOD2P04179 222 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 RXRBP28702 533 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 CYP2C19P33261 490 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 KCNMA1Q12791 1236 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 DDB1Q16531 1140 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 IQCEQ6IPM2 695 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 C1orf162Q8NEQ5 155 aaPredicted RBP9.82□□□□□ -0.84
VMP1-208ENST00000588617 IPPKQ9H8X2 491 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 PRDM5Q9NQX1 630 aaPredicted RBP9.82□□□□□ -0.84
VMP1-208ENST00000588617 MKS1Q9NXB0 559 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 H2AFY2Q9P0M6 372 aaPredicted RBP9.82□□□□□ -0.84
VMP1-208ENST00000588617 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
VMP1-208ENST00000588617 SHISA3A0PJX4 238 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 IFIT2P09913 472 aaKnown RBP9.81□□□□□ -0.84
VMP1-208ENST00000588617 TRIM27P14373 513 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 GLB1P16278 677 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 PDE6BP35913 854 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 C4orf46Q504U0 113 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 SGO2Q562F6 1265 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 TMEM240Q5SV17 173 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 APBB1IPQ7Z5R6 666 aaPredicted RBP9.81□□□□□ -0.84
VMP1-208ENST00000588617 CISD2Q8N5K1 135 aaKnown RBP9.81□□□□□ -0.84
VMP1-208ENST00000588617 RCBTB1Q8NDN9 531 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 NEDD1Q8NHV4 660 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 ENOX1Q8TC92 643 aaKnown RBP9.81□□□□□ -0.84
VMP1-208ENST00000588617 EZH1Q92800 747 aaPredicted RBP9.81□□□□□ -0.84
VMP1-208ENST00000588617 AKTIPQ9H8T0 292 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 OXSMQ9NWU1 459 aa9.81□□□□□ -0.84
VMP1-208ENST00000588617 LTFP02788 710 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 RBP3P10745 1247 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 KIR3DL1P43629 444 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 DHX8Q14562 1220 aaKnown RBP9.8□□□□□ -0.84
VMP1-208ENST00000588617 ARHGAP44Q17R89 818 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms