RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 RIOX1Q9H6W3 641 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 SENP2Q9HC62 589 aa25.31■■□□□ 1.64
CIRBP-219ENST00000588411 GPHNQ9NQX3 736 aaPredicted RBP25.31■■□□□ 1.64
CIRBP-219ENST00000588411 SLC27A2O14975 620 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 PRC1O43663 620 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 TXNP10599 105 aaKnown RBP25.3■■□□□ 1.64
CIRBP-219ENST00000588411 PTGS1P23219 599 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 ITGB8P26012 769 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 SHHQ15465 462 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 STXBP2Q15833 593 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 TMEM63BQ5T3F8 832 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 CREB3L3Q68CJ9 461 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 NFXL1Q6ZNB6 911 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 CCDC136Q96JN2 1154 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 TMEM87BQ96K49 555 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 MAP3K14Q99558 947 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 SZT2Q5T011 3432 aa25.3■■□□□ 1.64
CIRBP-219ENST00000588411 KPNA6O60684 536 aa25.29■■□□□ 1.64
CIRBP-219ENST00000588411 HSD17B4P51659 736 aa25.29■■□□□ 1.64
CIRBP-219ENST00000588411 SLC43A3Q8NBI5 491 aa25.29■■□□□ 1.64
CIRBP-219ENST00000588411 PIGSQ96S52 555 aa25.29■■□□□ 1.64
CIRBP-219ENST00000588411 LY9Q9HBG7 655 aa25.29■■□□□ 1.64
CIRBP-219ENST00000588411 COL20A1Q9P218 1284 aa25.29■■□□□ 1.64
CIRBP-219ENST00000588411 PNMA6FA0A0J9YX94 578 aa25.28■■□□□ 1.64
CIRBP-219ENST00000588411 CCDC69A6NI79 296 aa25.28■■□□□ 1.64
CIRBP-219ENST00000588411 GHRHRQ02643 423 aa25.28■■□□□ 1.64
CIRBP-219ENST00000588411 ZNF654Q8IZM8 581 aa25.28■■□□□ 1.64
CIRBP-219ENST00000588411 DEFB123Q8N688 67 aa25.28■■□□□ 1.64
CIRBP-219ENST00000588411 MTG1Q9BT17 334 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-219ENST00000588411 PPP1R11O60927 126 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-219ENST00000588411 CDC45O75419 566 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 MYL3P08590 195 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 EIF2AK2P19525 551 aaKnown RBP25.27■■□□□ 1.64
CIRBP-219ENST00000588411 GNAQP50148 359 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 NECTIN1Q15223 517 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 C9orf50Q5SZB4 431 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 MFSD5Q6N075 450 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 SEPT14Q6ZU15 432 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 TMEM199Q8N511 208 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 LZTS2Q9BRK4 669 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 PXMP2Q9NR77 195 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 MYH6P13533 1939 aa25.27■■□□□ 1.64
CIRBP-219ENST00000588411 GCOM1H8Y6P7 765 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-219ENST00000588411 EIF3JO75822 258 aaKnown RBP25.26■■□□□ 1.63
CIRBP-219ENST00000588411 CD4P01730 458 aa25.26■■□□□ 1.63
CIRBP-219ENST00000588411 POLR2MP0CAP2 368 aa25.26■■□□□ 1.63
CIRBP-219ENST00000588411 CALM1P0DP23 149 aa25.26■■□□□ 1.63
CIRBP-219ENST00000588411 CALM2P0DP24 149 aa25.26■■□□□ 1.63
CIRBP-219ENST00000588411 CALM3P0DP25 149 aa25.26■■□□□ 1.63
CIRBP-219ENST00000588411 PPIGQ13427 754 aaKnown RBP eCLIP25.26■■□□□ 1.636e-9■■□□□ 13.9
CIRBP-219ENST00000588411 SKAP1Q86WV1 359 aa25.26■■□□□ 1.63
CIRBP-219ENST00000588411 RNPC3Q96LT9 517 aaKnown RBP25.26■■□□□ 1.63
CIRBP-219ENST00000588411 SH2B2O14492 632 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-219ENST00000588411 CYTH3O43739 400 aa25.25■■□□□ 1.63
CIRBP-219ENST00000588411 NR3C2P08235 984 aa25.25■■□□□ 1.63
CIRBP-219ENST00000588411 PSMC6P62333 389 aa25.25■■□□□ 1.63
CIRBP-219ENST00000588411 PURAQ00577 322 aaKnown RBP25.25■■□□□ 1.63
CIRBP-219ENST00000588411 RRP36Q96EU6 259 aaKnown RBP25.25■■□□□ 1.63
CIRBP-219ENST00000588411 SPZ1Q9BXG8 430 aa25.25■■□□□ 1.63
CIRBP-219ENST00000588411 SEC63Q9UGP8 760 aaKnown RBP25.25■■□□□ 1.63
CIRBP-219ENST00000588411 GRIN2DO15399 1336 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 A6NJR5 290 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 OPLAHO14841 1288 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 GH1P01241 217 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 SMARCA1P28370 1054 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 LIFRP42702 1097 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 SLC35G1Q2M3R5 365 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 CCDC62Q6P9F0 684 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 COPS5Q92905 334 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 PPP1R12CQ9BZL4 782 aa25.24■■□□□ 1.63
CIRBP-219ENST00000588411 SUPT20HL2P0C7V6 817 aa25.23■■□□□ 1.63
CIRBP-219ENST00000588411 HOXA13P31271 388 aaPredicted RBP25.23■■□□□ 1.63
CIRBP-219ENST00000588411 FAM109BQ6ICB4 259 aaPredicted RBP25.23■■□□□ 1.63
CIRBP-219ENST00000588411 MYL10Q9BUA6 226 aa25.23■■□□□ 1.63
CIRBP-219ENST00000588411 HIPK3Q9H422 1215 aa25.23■■□□□ 1.63
CIRBP-219ENST00000588411 SLC12A7Q9Y666 1083 aa25.23■■□□□ 1.63
CIRBP-219ENST00000588411 ARIH2O95376 493 aa25.22■■□□□ 1.63
CIRBP-219ENST00000588411 NEFLP07196 543 aa25.22■■□□□ 1.63
CIRBP-219ENST00000588411 EPHB4P54760 987 aa25.22■■□□□ 1.63
CIRBP-219ENST00000588411 PIBF1Q8WXW3 757 aa25.22■■□□□ 1.63
CIRBP-219ENST00000588411 PDCD2LQ9BRP1 358 aa25.22■■□□□ 1.63
CIRBP-219ENST00000588411 ALDH8A1Q9H2A2 487 aaPredicted RBP25.22■■□□□ 1.63
CIRBP-219ENST00000588411 MRVI1Q9Y6F6 885 aa25.22■■□□□ 1.63
CIRBP-219ENST00000588411 B4GALT4O60513 344 aa25.21■■□□□ 1.63
CIRBP-219ENST00000588411 MYCLP12524 364 aaPredicted RBP25.21■■□□□ 1.63
CIRBP-219ENST00000588411 SMAD3P84022 425 aaKnown RBP25.21■■□□□ 1.63
CIRBP-219ENST00000588411 LY6KQ17RY6 165 aa25.21■■□□□ 1.63
CIRBP-219ENST00000588411 KCNV1Q6PIU1 500 aa25.21■■□□□ 1.63
CIRBP-219ENST00000588411 SYNE3Q6ZMZ3 975 aa25.21■■□□□ 1.63
CIRBP-219ENST00000588411 Q7L0L9 218 aa25.21■■□□□ 1.63
CIRBP-219ENST00000588411 TRPV6Q9H1D0 765 aa25.21■■□□□ 1.63
CIRBP-219ENST00000588411 CCND2P30279 289 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 KRT32Q14532 448 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 FAM47CQ5HY64 1035 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 ZNF697Q5TEC3 545 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 NFRKBQ6P4R8 1299 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 PSRC1Q6PGN9 363 aaPredicted RBP25.2■■□□□ 1.62
CIRBP-219ENST00000588411 FCHSD1Q86WN1 690 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 AFG1LQ8WV93 481 aa25.2■■□□□ 1.62
CIRBP-219ENST00000588411 CUL5Q93034 780 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms