RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 GRIN1Q05586 938 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 GRM1Q13255 1194 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 PTGDRQ13258 359 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 BAATQ14032 418 aaPredicted RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 AXDND1Q5T1B0 1012 aaPredicted RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 NCAPG2Q86XI2 1143 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 CHST13Q8NET6 341 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 GTF3C2Q8WUA4 911 aaPredicted RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 CLIC6Q96NY7 704 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 TAAR1Q96RJ0 339 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 A1CFQ9NQ94 594 aaKnown RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
VMP1-207ENST00000588131 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 ADGRA2Q96PE1 1338 aa12.86□□□□□ -0.35
VMP1-207ENST00000588131 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 SLC37A4O43826 429 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 TRAK2O60296 914 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 NEMFO60524 1076 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 BMP15O95972 392 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 ERCC3P19447 782 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 PTPREP23469 700 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 USP11P51784 963 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 ANKRD13CQ8N6S4 541 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 MAP3K20Q9NYL2 800 aaKnown RBP12.85□□□□□ -0.35
VMP1-207ENST00000588131 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 MORF4L1Q9UBU8 362 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 FRMPD4Q14CM0 1322 aa12.85□□□□□ -0.35
VMP1-207ENST00000588131 CYP3A7-CYP3A51PA0A087WV96 503 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 CUTAO60888 179 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 SLC25A27O95847 323 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 CYP3A4P08684 503 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 LIG1P18858 919 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 CYP3A7P24462 503 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 IL17AQ16552 155 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 SHC4Q6S5L8 630 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 KRI1Q8N9T8 703 aaKnown RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 GPRC5AQ8NFJ5 357 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 IL31RAQ8NI17 732 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 PORCNQ9H237 461 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 GOLPH3LQ9H4A5 285 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
VMP1-207ENST00000588131 DDX25Q9UHL0 483 aaKnown RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 SRPRBQ9Y5M8 271 aaKnown RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
VMP1-207ENST00000588131 A0A1W2PQ27 194 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 A0A1W2PQ64 194 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 A0A1W2PQD8 194 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 GOLGA6L4A6NEF3 574 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 FAM86B1E9PN63 330 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 AOC2O75106 756 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 MBD3O95983 291 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 FAM86B2P0C5J1 330 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 OR52Z1P0C646 297 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
VMP1-207ENST00000588131 EIF2AK2P19525 551 aaKnown RBP12.83□□□□□ -0.36
VMP1-207ENST00000588131 CIITAP33076 1130 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 COPB2P35606 906 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 INHBEP58166 350 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 SREBF2Q12772 1141 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
VMP1-207ENST00000588131 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.83□□□□□ -0.36
VMP1-207ENST00000588131 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
VMP1-207ENST00000588131 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 CAPNS2Q96L46 248 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 MTMR9Q96QG7 549 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 NAP1L4Q99733 375 aaKnown RBP12.83□□□□□ -0.36
VMP1-207ENST00000588131 MAF1Q9H063 256 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 EFCC1Q9HA90 598 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 PXMP2Q9NR77 195 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 CPA4Q9UI42 421 aa12.83□□□□□ -0.36
VMP1-207ENST00000588131 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 TM4SF4P48230 202 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 PGM5Q15124 567 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
VMP1-207ENST00000588131 Q4G0T1 1027 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 FSIP1Q8NA03 581 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 CYP2W1Q8TAV3 490 aa12.82□□□□□ -0.36
VMP1-207ENST00000588131 MRPS27Q92552 414 aaKnown RBP12.82□□□□□ -0.36
VMP1-207ENST00000588131 GJA10Q969M2 543 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms