RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TRIM32Q13049 653 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 BECN1Q14457 450 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 DNERQ8NFT8 737 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 FBXO18Q8NFZ0 1043 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 GLT8D2Q9H1C3 349 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 MCM3APO60318 1980 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 BTBD18B2RXH4 712 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 CYP2C19P33261 490 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 NR5A1Q13285 461 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 TRIM29Q14134 588 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 PGM5Q15124 567 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 EARS2Q5JPH6 523 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 PRAMEF19Q5SWL8 479 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 ARHGEF16Q5VV41 709 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 OLFML2BQ68BL8 750 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 MAMDC4Q6UXC1 1216 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 REXO1Q8N1G1 1221 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 IL31RAQ8NI17 732 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 NSUN6Q8TEA1 469 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 ZFP91Q96JP5 570 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 ANO3Q9BYT9 981 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 ADD3Q9UEY8 706 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 KIF3AQ9Y496 699 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 RPTORQ8N122 1335 aa12.26□□□□□ -0.45
SMARCA4-213ENST00000587988 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 KIF28PB7ZC32 967 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 EDIL3O43854 480 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 NR3C2P08235 984 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 EDNRBP24530 442 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 GRK4P32298 578 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 KRT2P35908 639 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 ANP32AP39687 249 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 FBXO46Q6PJ61 603 aaPredicted RBP12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 MORC4Q8TE76 937 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 TNFRSF25Q93038 417 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 FRMPD4Q14CM0 1322 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 LRRC37A2A6NM11 1700 aa12.25□□□□□ -0.45
SMARCA4-213ENST00000587988 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 ASB14A6NK59 587 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 MYH7BA7E2Y1 1941 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 FOSP01100 380 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 MYCLP12524 364 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 SYT1P21579 422 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 MRPS9P82933 396 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 CACNB2Q08289 660 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 PKN2Q16513 984 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 TEX2Q8IWB9 1127 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 MSL3Q8N5Y2 521 aaKnown RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 TRPV1Q8NER1 839 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 SYNGAP1Q96PV0 1343 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 MCOLN1Q9GZU1 580 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 KATNBL1Q9H079 304 aa12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
SMARCA4-213ENST00000587988 H3BQV1 296 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 HMGCRP04035 888 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 INHAP05111 366 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 SREBF1P36956 1147 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 PDE4DQ08499 809 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 MFSD14CQ5VZR4 134 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 PIK3AP1Q6ZUJ8 805 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 VSIG10LQ86VR7 867 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 TBCKQ8TEA7 893 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 CRYGNQ8WXF5 182 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 BRMS1Q9HCU9 246 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 RTEL1Q9NZ71 1219 aa12.23□□□□□ -0.45
SMARCA4-213ENST00000587988 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 RGS20O76081 388 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 ZNF865P0CJ78 1059 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 CYBAP13498 195 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 CCND2P30279 289 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 CCND3P30281 292 aaPredicted RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 ARHGAP4P98171 946 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 STXBP2Q15833 593 aa12.22□□□□□ -0.45
SMARCA4-213ENST00000587988 INF2Q27J81 1249 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms