RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
DNMT1-213ENST00000587604 PTPN11Q06124 597 aaPredicted RBP16.5■□□□□ 0.23
DNMT1-213ENST00000587604 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
DNMT1-213ENST00000587604 FAM47CQ5HY64 1035 aa16.5■□□□□ 0.23
DNMT1-213ENST00000587604 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
DNMT1-213ENST00000587604 DEFB128Q7Z7B8 93 aa16.5■□□□□ 0.23
DNMT1-213ENST00000587604 TET1Q8NFU7 2136 aa16.5■□□□□ 0.23
DNMT1-213ENST00000587604 MAF1Q9H063 256 aa16.5■□□□□ 0.23
DNMT1-213ENST00000587604 RNF41Q9H4P4 317 aaPredicted RBP16.5■□□□□ 0.23
DNMT1-213ENST00000587604 TRANK1O15050 2925 aa16.5■□□□□ 0.23
DNMT1-213ENST00000587604 PITPNM1O00562 1244 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 TXNP10599 105 aaKnown RBP16.49■□□□□ 0.23
DNMT1-213ENST00000587604 ACTN1P12814 892 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 TMEM67Q5HYA8 995 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 RETREG2Q8NC44 543 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 ESR2Q92731 530 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 COPS5Q92905 334 aa16.49■□□□□ 0.23
DNMT1-213ENST00000587604 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-213ENST00000587604 TRIM6-TRIM34B2RNG4 842 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 NT5C2P49902 561 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 MFAP1P55081 439 aaKnown RBP16.48■□□□□ 0.23
DNMT1-213ENST00000587604 TBC1D10CQ8IV04 446 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 PHOSPHO2Q8TCD6 241 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 ADAMTS19Q8TE59 1207 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
DNMT1-213ENST00000587604 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
DNMT1-213ENST00000587604 MYH6P13533 1939 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 REV3LO60673 3130 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 ARIH2O95376 493 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 GOLGA8HP0CJ92 632 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 POU3F3P20264 500 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-213ENST00000587604 BFSP2Q13515 415 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 USH1GQ495M9 461 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 CCDC178Q5BJE1 867 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 CCDC62Q6P9F0 684 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 SLC9A7Q96T83 725 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 UBA5Q9GZZ9 404 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
DNMT1-213ENST00000587604 ZNF213O14771 459 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 CA3P07451 260 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 SDSP20132 328 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 IQCA1Q86XH1 822 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 PPP1R13LQ8WUF5 828 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 UHRF1Q96T88 793 aaPredicted RBP16.46■□□□□ 0.23
DNMT1-213ENST00000587604 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
DNMT1-213ENST00000587604 LNPKQ9C0E8 428 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 NOD1Q9Y239 953 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 XIRP2A4UGR9 3374 aa16.46■□□□□ 0.23
DNMT1-213ENST00000587604 ABCB11O95342 1321 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 NEDD4P46934 1319 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 CDC37Q16543 378 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-213ENST00000587604 PTGISQ16647 500 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 MICALL1Q8N3F8 863 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 SYTL5Q8TDW5 730 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-213ENST00000587604 NSUN6Q8TEA1 469 aaKnown RBP16.45■□□□□ 0.22
DNMT1-213ENST00000587604 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 IWS1Q96ST2 819 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 TANC1Q9C0D5 1861 aa16.45■□□□□ 0.22
DNMT1-213ENST00000587604 KIF28PB7ZC32 967 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-213ENST00000587604 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 AAK1Q2M2I8 961 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 MCF2L2Q86YR7 1114 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 HERC6Q8IVU3 1022 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 AFG1LQ8WV93 481 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 TAAR1Q96RJ0 339 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 KAT14Q9H8E8 782 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 MTCH2Q9Y6C9 303 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
DNMT1-213ENST00000587604 RFXAPO00287 272 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 KDM4AO75164 1064 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 BAIAP3O94812 1187 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 GH1P01241 217 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 MMP3P08254 477 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 BMP1P13497 986 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 CASTP20810 708 aaKnown RBP16.43■□□□□ 0.22
DNMT1-213ENST00000587604 ARHGAP1Q07960 439 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 STXBP2Q15833 593 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 LY6KQ17RY6 165 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 ASPRV1Q53RT3 343 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 AFAP1L1Q8TED9 768 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
DNMT1-213ENST00000587604 RMDN3Q96TC7 470 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 CERS4Q9HA82 394 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 COL20A1Q9P218 1284 aa16.43■□□□□ 0.22
DNMT1-213ENST00000587604 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
DNMT1-213ENST00000587604 BRWD1Q9NSI6 2320 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms