RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TARBP2Q15633 366 aaKnown RBP6.62□□□□□ -1.35
ZNF540-204ENST00000586792 MAP3K11Q16584 847 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 HSF5Q4G112 596 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-204ENST00000586792 NT5DC1Q5TFE4 455 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 FERMT3Q86UX7 667 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 SORCS2Q96PQ0 1159 aa6.62□□□□□ -1.35
ZNF540-204ENST00000586792 ROBO1Q9Y6N7 1651 aa6.61□□□□□ -1.35
ZNF540-204ENST00000586792 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
ZNF540-204ENST00000586792 SYPP08247 313 aa6.61□□□□□ -1.35
ZNF540-204ENST00000586792 IGFBP6P24592 240 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-204ENST00000586792 GBP1P32455 592 aa6.61□□□□□ -1.35
ZNF540-204ENST00000586792 NR1I3Q14994 352 aa6.61□□□□□ -1.35
ZNF540-204ENST00000586792 ZC3H14Q6PJT7 736 aaKnown RBP6.61□□□□□ -1.35
ZNF540-204ENST00000586792 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-204ENST00000586792 SETD1AO15047 1707 aaKnown RBP6.61□□□□□ -1.35
ZNF540-204ENST00000586792 MYOM2P54296 1465 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 DCCP43146 1447 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 PTCH1Q13635 1447 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 METP08581 1390 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 NALCNQ8IZF0 1738 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-204ENST00000586792 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-204ENST00000586792 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 C1QTNF3-AMACRE9PGA6 284 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 IGSF3O75054 1194 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 FKTNO75072 461 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 PRKCAP17252 672 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 HSPA1LP34931 641 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 CPZQ66K79 652 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 PUS7Q96PZ0 661 aaKnown RBP6.6□□□□□ -1.35
ZNF540-204ENST00000586792 TNFRSF12AQ9NP84 129 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 SUSD2Q9UGT4 822 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
ZNF540-204ENST00000586792 PIK3C2GO75747 1445 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 PTPRUQ92729 1446 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 DISP3Q9P2K9 1392 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 PRR36Q9H6K5 1346 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 ITGB3P05106 788 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 LIMS1P48059 325 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 MAPKAPK2P49137 400 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 HMGA2P52926 109 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 BBS9Q3SYG4 887 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 RETREG2Q8NC44 543 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 ACSL6Q9UKU0 697 aa6.59□□□□□ -1.35
ZNF540-204ENST00000586792 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-204ENST00000586792 PHLPP1O60346 1717 aa6.59□□□□□ -1.36
ZNF540-204ENST00000586792 KNDC1Q76NI1 1749 aa6.59□□□□□ -1.36
ZNF540-204ENST00000586792 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.36
ZNF540-204ENST00000586792 ADGRL3Q9HAR2 1447 aa6.59□□□□□ -1.36
ZNF540-204ENST00000586792 ADGRF5Q8IZF2 1346 aa6.58□□□□□ -1.36
ZNF540-204ENST00000586792 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
ZNF540-204ENST00000586792 MSL3P1P0C860 447 aa6.58□□□□□ -1.36
ZNF540-204ENST00000586792 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
ZNF540-204ENST00000586792 NUP43Q8NFH3 380 aa6.58□□□□□ -1.36
ZNF540-204ENST00000586792 SPATA25Q9BR10 227 aa6.58□□□□□ -1.36
ZNF540-204ENST00000586792 SH3D21A4FU49 640 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 GNA15P30679 374 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 PLEKHN1Q494U1 663 aaPredicted RBP6.57□□□□□ -1.36
ZNF540-204ENST00000586792 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 ZPBP2Q6X784 338 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 FNIP1Q8TF40 1166 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 ASB16Q96NS5 453 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 KIF2CQ99661 725 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 C1orf115Q9H7X2 142 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 STK26Q9P289 416 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 GNEQ9Y223 722 aaKnown RBP6.57□□□□□ -1.36
ZNF540-204ENST00000586792 PRAG1Q86YV5 1406 aa6.57□□□□□ -1.36
ZNF540-204ENST00000586792 MED1Q15648 1581 aaPredicted RBP6.57□□□□□ -1.36
ZNF540-204ENST00000586792 DHX57Q6P158 1386 aaKnown RBP6.57□□□□□ -1.36
ZNF540-204ENST00000586792 NRXN1Q9ULB1 1477 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 RGS13O14921 159 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 LDHBP07195 334 aaKnown RBP6.56□□□□□ -1.36
ZNF540-204ENST00000586792 GDF5P43026 501 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 FOXO4P98177 505 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-204ENST00000586792 SAPCD2Q86UD0 394 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 TTC9BQ8N6N2 239 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 C1QTNF3Q9BXJ4 246 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.56□□□□□ -1.36
ZNF540-204ENST00000586792 PMF1-BGLAPU3KQ54 211 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 YTHDC2Q9H6S0 1430 aaKnown RBP6.56□□□□□ -1.36
ZNF540-204ENST00000586792 CDC42BPGQ6DT37 1551 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 LRPPRCP42704 1394 aaKnown RBP6.56□□□□□ -1.36
ZNF540-204ENST00000586792 ROBO2Q9HCK4 1378 aa6.56□□□□□ -1.36
ZNF540-204ENST00000586792 ASXL1Q8IXJ9 1541 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 CNR2P34972 360 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 GJA9P57773 515 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 NBPF9Q3BBW0 867 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 TMC3Q7Z5M5 1100 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 SAMD11Q96NU1 681 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 FAN1Q9Y2M0 1017 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
ZNF540-204ENST00000586792 TECPR2O15040 1411 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms