RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
CDRT1-207ENST00000583965 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-207ENST00000583965 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
CDRT1-207ENST00000583965 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 ADAMTS3O15072 1205 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 HOXC6P09630 235 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 CTGFP29279 349 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 SREBF1P36956 1147 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 RGS2P41220 211 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
CDRT1-207ENST00000583965 DPP9Q86TI2 863 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 CD99L2Q8TCZ2 262 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 RASGRP4Q8TDF6 673 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 USP6NLQ92738 828 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 IWS1Q96ST2 819 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 RMDN3Q96TC7 470 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 PXMP2Q9NR77 195 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 TMEM260Q9NX78 707 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
CDRT1-207ENST00000583965 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 COBLO75128 1261 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 F13A1P00488 732 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 PGK2P07205 417 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 ALDH5A1P51649 535 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-207ENST00000583965 USP11P51784 963 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 PRMT2P55345 433 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 CNTN2Q02246 1040 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 RESTQ13127 1097 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 PKP1Q13835 747 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
CDRT1-207ENST00000583965 APBA2Q99767 749 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
CDRT1-207ENST00000583965 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
CDRT1-207ENST00000583965 DOCK5Q9H7D0 1870 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 SOWAHBA6NEL2 793 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 ASB14A6NK59 587 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 STAM2O75886 525 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 CYP3A4P08684 503 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
CDRT1-207ENST00000583965 TRAPPC10P48553 1259 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 PGM5Q15124 567 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 PCNX4Q63HM2 1172 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 FERMT3Q86UX7 667 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 TRMT44Q8IYL2 757 aaKnown RBP13.29□□□□□ -0.28
CDRT1-207ENST00000583965 TBCKQ8TEA7 893 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 NAP1L4Q99733 375 aaKnown RBP13.29□□□□□ -0.28
CDRT1-207ENST00000583965 PDCD2LQ9BRP1 358 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 SRRDQ9UH36 339 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
CDRT1-207ENST00000583965 NR3C2P08235 984 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 HSPA1AP0DMV8 641 aaKnown RBP13.28□□□□□ -0.28
CDRT1-207ENST00000583965 HSPA1BP0DMV9 641 aaKnown RBP13.28□□□□□ -0.28
CDRT1-207ENST00000583965 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
CDRT1-207ENST00000583965 EIF2AK2P19525 551 aaKnown RBP13.28□□□□□ -0.28
CDRT1-207ENST00000583965 EDNRBP24530 442 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 CCND2P30279 289 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-207ENST00000583965 IRF5Q13568 498 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 INF2Q27J81 1249 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 RILPL1Q5EBL4 403 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 MAMDC4Q6UXC1 1216 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 NEK8Q86SG6 692 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 MORC4Q8TE76 937 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 MAML3Q96JK9 1138 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 FGD4Q96M96 766 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 ZDHHC9Q9Y397 364 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 ASTN1O14525 1302 aa13.28□□□□□ -0.28
CDRT1-207ENST00000583965 FOXN1O15353 648 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-207ENST00000583965 GCFC2P16383 781 aaKnown RBP13.27□□□□□ -0.29
CDRT1-207ENST00000583965 CIITAP33076 1130 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 FLT3LGP49771 235 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 ORC2Q13416 577 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-207ENST00000583965 STXBP2Q15833 593 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.29
CDRT1-207ENST00000583965 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 OLFML2BQ68BL8 750 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 ATL3Q6DD88 541 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 NPLOC4Q8TAT6 608 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 PURBQ96QR8 312 aaKnown RBP13.27□□□□□ -0.29
CDRT1-207ENST00000583965 GABRQQ9UN88 632 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 SYNGAP1Q96PV0 1343 aa13.27□□□□□ -0.29
CDRT1-207ENST00000583965 MYH9P35579 1960 aaKnown RBP13.27□□□□□ -0.29
CDRT1-207ENST00000583965 HTTP42858 3142 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms