RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 GABPAQ06546 454 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 GRB14Q14449 540 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 NAA30Q147X3 362 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 ANO1Q5XXA6 986 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 PLEKHH3Q7Z736 793 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 SIAH1Q8IUQ4 282 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 SOCS4Q8WXH5 440 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 FRAT1Q92837 279 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 COL26A1Q96A83 441 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 EDC3Q96F86 508 aaKnown RBP9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 RIOK1Q9BRS2 568 aaKnown RBP9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 AS3MTQ9HBK9 375 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 GPR108Q9NPR9 543 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 STXBP5LQ9Y2K9 1186 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 CHD7Q9P2D1 2997 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 C19orf81C9J6K1 198 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 COBLO75128 1261 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 MAPK4P31152 587 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 RGS2P41220 211 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 ATP8B2P98198 1209 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 PABPC4Q13310 644 aaKnown RBP eCLIP9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 SEPT2Q15019 361 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 TTC39AQ5SRH9 613 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 GORABQ5T7V8 394 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 CATSPERGQ6ZRH7 1159 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 ZNF512BQ96KM6 892 aaPredicted RBP9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 DHX36Q9H2U1 1008 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 TIMMDC1Q9NPL8 285 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 TMOD4Q9NZQ9 345 aa9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 NOP58Q9Y2X3 529 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-225ENST00000583438 TCRBV5S4A2TA0A5A2 114 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 RBAK-RBAKDNI3L0D1 243 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 HOXC6P09630 235 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 SERPINB4P48594 390 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 EPHB4P54760 987 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 G3BP1Q13283 466 aaKnown RBP eCLIP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 PRAMEF19Q5SWL8 479 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 GJC2Q5T442 439 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 LBX2Q6XYB7 198 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 FOXP4Q8IVH2 680 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 ALDH16A1Q8IZ83 802 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 MAGEB6Q8N7X4 407 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 LENG1Q96BZ8 264 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 PHACTR1Q9C0D0 580 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 KIAA1683Q9H0B3 1180 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 SAP130Q9H0E3 1048 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 TTYH1Q9H313 450 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 RPAP3Q9H6T3 665 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 DDX20Q9UHI6 824 aaKnown RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 GNEQ9Y223 722 aaKnown RBP9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 IVNS1ABPQ9Y6Y0 642 aa9.6□□□□□ -0.87
PPP4R1-225ENST00000583438 MYO9BQ13459 2157 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 CYP2D7A0A087X1C5 515 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 IDH1O75874 414 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 RTP1P59025 263 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 PTSQ03393 145 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 RAB3GAP1Q15042 981 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 SHHQ15465 462 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 LCORLQ8N3X6 602 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 CRACR2BQ8N4Y2 399 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 MOV10L1Q9BXT6 1211 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 SENP6Q9GZR1 1112 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 EHD4Q9H223 541 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 EXOC6BQ9Y2D4 811 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 RABGAP1Q9Y3P9 1069 aa9.59□□□□□ -0.87
PPP4R1-225ENST00000583438 PTPRSQ13332 1948 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 TRIM43BA6NCK2 446 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 SLC15A5A6NIM6 579 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 PRKAB2O43741 272 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 BAG3O95817 575 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 TAL1P17542 331 aaPredicted RBP9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 ATP4AP20648 1035 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 MSX1P28360 303 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 SNX17Q15036 470 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 FAM47AQ5JRC9 791 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 COX20Q5RI15 118 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 CEP85Q6P2H3 762 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 GTF3C2Q8WUA4 911 aaPredicted RBP9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 SDR42E1Q8WUS8 393 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 TRIM43Q96BQ3 446 aaPredicted RBP9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 DYNLL2Q96FJ2 89 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 PDLIM7Q9NR12 457 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 ZDHHC3Q9NYG2 299 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 SERPINB13Q9UIV8 391 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 LRFN2Q9ULH4 789 aa9.58□□□□□ -0.88
PPP4R1-225ENST00000583438 SCN5AQ14524 2016 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 A0A1B0GTH6 734 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 SLC35F4A4IF30 521 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 AKR1B1P15121 316 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 CAPN2P17655 700 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 ADORA2AP29274 412 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 ABCB5Q2M3G0 1257 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 TRIM60Q495X7 471 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 CERKLQ49MI3 558 aaPredicted RBP9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
PPP4R1-225ENST00000583438 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms