RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 RFC2P35250 354 aa17.41■□□□□ 0.38
CDK5RAP3-226ENST00000583182 PDE4DQ08499 809 aa17.41■□□□□ 0.38
CDK5RAP3-226ENST00000583182 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-226ENST00000583182 TCP11L1Q9NUJ3 509 aa17.41■□□□□ 0.38
CDK5RAP3-226ENST00000583182 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 ARIH2O95376 493 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 FGAP02671 866 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 TAP1Q03518 808 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 AAK1Q2M2I8 961 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 BRDTQ58F21 947 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 HERC6Q8IVU3 1022 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 PHOSPHO2Q8TCD6 241 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 SCFD2Q8WU76 684 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 RAD50Q92878 1312 aa17.4■□□□□ 0.38
CDK5RAP3-226ENST00000583182 KPNA6O60684 536 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 PTPN11Q06124 597 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 SPRED2Q7Z698 418 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 DNERQ8NFT8 737 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 EVI5LQ96CN4 794 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 HELLSQ9NRZ9 838 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 WDR19Q8NEZ3 1342 aa17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 COL4A4P53420 1690 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-226ENST00000583182 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
CDK5RAP3-226ENST00000583182 SNHG28P0DPA3 235 aa17.38■□□□□ 0.37
CDK5RAP3-226ENST00000583182 BFSP2Q13515 415 aa17.38■□□□□ 0.37
CDK5RAP3-226ENST00000583182 CTAGE1Q96RT6 745 aa17.38■□□□□ 0.37
CDK5RAP3-226ENST00000583182 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
CDK5RAP3-226ENST00000583182 CHMP4BP1P59074 171 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 HAND2P61296 217 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 GPNMBQ14956 572 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 MPHOSPH6Q99547 160 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 CPVLQ9H3G5 476 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 NOD1Q9Y239 953 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 KIAA1217Q5T5P2 1943 aa17.37■□□□□ 0.37
CDK5RAP3-226ENST00000583182 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 LPXNO60711 386 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 BAIAP3O94812 1187 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 HSPD1P10809 573 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 PLA2G5P39877 138 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 GRB10Q13322 594 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 PTGISQ16647 500 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 USH1GQ495M9 461 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 MCMDC2Q4G0Z9 681 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 GDF6Q6KF10 455 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TBC1D5Q92609 795 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TTC14Q96N46 770 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 COG5Q9UP83 839 aa17.36■□□□□ 0.37
CDK5RAP3-226ENST00000583182 LCHNA4D1U4 455 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 RBAK-RBAKDNI3L0D1 243 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TLL1O43897 1013 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 MMP3P08254 477 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 ANKRD45Q5TZF3 282 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TMCO2Q7Z6W1 182 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TBC1D10CQ8IV04 446 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 RGS22Q8NE09 1264 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 DHX38Q92620 1227 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 KAT2BQ92831 832 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 C1QTNF1Q9BXJ1 281 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 ZMYM6O95789 1325 aa17.35■□□□□ 0.37
CDK5RAP3-226ENST00000583182 B4DLN1 442 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 MRPL12P52815 198 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 PDE1AP54750 535 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 WDR5P61964 334 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 SESTD1Q86VW0 696 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 CAGE1Q8TC20 777 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 AFAP1L1Q8TED9 768 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 TAAR1Q96RJ0 339 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 UBA5Q9GZZ9 404 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 EPHX3Q9H6B9 360 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 COL20A1Q9P218 1284 aa17.34■□□□□ 0.37
CDK5RAP3-226ENST00000583182 BRWD1Q9NSI6 2320 aa17.33■□□□□ 0.37
CDK5RAP3-226ENST00000583182 MYH6P13533 1939 aa17.33■□□□□ 0.37
CDK5RAP3-226ENST00000583182 KCNJ6P48051 423 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 DEFB103AP81534 67 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 NMIQ13287 307 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 TCTN1Q2MV58 587 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 GPATCH4Q5T3I0 446 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 SYTL5Q8TDW5 730 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 HLA-CQ95604 372 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 FAM122AQ96E09 287 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 ZKSCAN3Q9BRR0 538 aa17.33■□□□□ 0.36
CDK5RAP3-226ENST00000583182 NEDD4P46934 1319 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 CCDC171Q6TFL3 1326 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 MYH7BA7E2Y1 1941 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 GH1P01241 217 aa17.32■□□□□ 0.36
CDK5RAP3-226ENST00000583182 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms