RNA–Protein interactions for RNA: ENST00000582590.1

SLC46A1-203, Transcript of solute carrier family 46 member 1, humanhuman

TSL 2

Gene SLC46A1, Length 1,435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-203ENST00000582590 PSTPIP2Q9H939 334 aa21.92■■□□□ 1.1
SLC46A1-203ENST00000582590 UPF2Q9HAU5 1272 aaKnown RBP21.92■■□□□ 1.1
SLC46A1-203ENST00000582590 PDGFCQ9NRA1 345 aa21.92■■□□□ 1.1
SLC46A1-203ENST00000582590 LRRC37A2A6NM11 1700 aa21.92■■□□□ 1.1
SLC46A1-203ENST00000582590 hCG_1984214I3L0E3 225 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 PIK3CDO00329 1044 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 MEIS2O14770 477 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 PRPF3O43395 683 aaKnown RBP21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 PFKFB3Q16875 520 aaPredicted RBP21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 TYW1BQ6NUM6 668 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 PPP1R18Q6NYC8 613 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 USP17L6PQ6QN14 398 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 ZNF713Q8N859 430 aaPredicted RBP21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 CUL5Q93034 780 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 BARHL2Q9NY43 387 aa21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 RBM27Q9P2N5 1060 aaKnown RBP21.91■■□□□ 1.1
SLC46A1-203ENST00000582590 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 STXBP3O00186 592 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 DNM1LO00429 736 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 MCM3APO60318 1980 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 PPFIA3O75145 1194 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 DUSP11O75319 330 aaKnown RBP21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 PGK1P00558 417 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 SCG2P13521 617 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 NAPAP54920 295 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 TNFAIP2Q03169 654 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 NECAB2Q7Z6G3 386 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 ARRDC4Q8NCT1 418 aa21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 RNF26Q9BY78 433 aaPredicted RBP21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 MKI67P46013 3256 aaKnown RBP21.9■■□□□ 1.1
SLC46A1-203ENST00000582590 CPLX1O14810 134 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 PFKFB2O60825 505 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 MYCNP04198 464 aaPredicted RBP21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 NR3C2P08235 984 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 AKAP17AQ02040 695 aaKnown RBP21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 SCRN1Q12765 414 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 LRRC41Q15345 812 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 STXBP2Q15833 593 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 PKN1Q16512 942 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 GJC2Q5T442 439 aaPredicted RBP21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 IQSEC1Q6DN90 963 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 NOL8Q76FK4 1167 aaKnown RBP21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 SMARCC2Q8TAQ2 1214 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 PDCD2LQ9BRP1 358 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 SLC26A6Q9BXS9 759 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 SLKQ9H2G2 1235 aaPredicted RBP21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 C11orf49Q9H6J7 331 aa21.89■■□□□ 1.1
SLC46A1-203ENST00000582590 FRMPD3Q5JV73 1810 aa21.89■■□□□ 1.09
SLC46A1-203ENST00000582590 SYNRGQ9UMZ2 1314 aa21.89■■□□□ 1.09
SLC46A1-203ENST00000582590 RBM47A0AV96 593 aaKnown RBP21.89■■□□□ 1.09
SLC46A1-203ENST00000582590 ADAMTS4O75173 837 aa21.89■■□□□ 1.09
SLC46A1-203ENST00000582590 SMPD1P17405 629 aa21.89■■□□□ 1.09
SLC46A1-203ENST00000582590 FRMPD4Q14CM0 1322 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 COL6A1P12109 1028 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 PGM5Q15124 567 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 TMEM63BQ5T3F8 832 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 CPLX2Q6PUV4 134 aaKnown RBP21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 RNF180Q86T96 592 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 IL31RAQ8NI17 732 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 WDR11Q9BZH6 1224 aa21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 GNEQ9Y223 722 aaKnown RBP21.88■■□□□ 1.09
SLC46A1-203ENST00000582590 KBTBD13C9JR72 458 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 EIF3JO75822 258 aaKnown RBP21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 UBE2SQ16763 222 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 ME3Q16798 604 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 VSIG10LQ86VR7 867 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 TRIM22Q8IYM9 498 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 SCFD2Q8WU76 684 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 UPF3AQ9H1J1 476 aaKnown RBP21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 RIC8AQ9NPQ8 531 aa21.87■■□□□ 1.09
SLC46A1-203ENST00000582590 SMCO2A6NFE2 343 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 LARGE1O95461 756 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 MYCLP12524 364 aaPredicted RBP21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 PTGS1P23219 599 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 ADCY7P51828 1080 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 GJA9P57773 515 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 SSRP1Q08945 709 aaKnown RBP21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 DUSP28Q4G0W2 176 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 TEX2Q8IWB9 1127 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 KLHDC9Q8NEP7 349 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 SPC25Q9HBM1 224 aa21.86■■□□□ 1.09
SLC46A1-203ENST00000582590 MYADML2A6NDP7 307 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 CDKL5O76039 1030 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 C6orf222P0C671 652 aaPredicted RBP21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 CCND2P30279 289 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 IRX5P78411 483 aaPredicted RBP21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 SEPT14Q6ZU15 432 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 TLK2Q86UE8 772 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 TBC1D32Q96NH3 1257 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 HTATIP2Q9BUP3 242 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 BACH2Q9BYV9 841 aa21.85■■□□□ 1.09
SLC46A1-203ENST00000582590 ESYT2A0FGR8 921 aa21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 CST5P28325 142 aaPredicted RBP21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 NKX3-2P78367 333 aa21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 NECAB1Q8N987 351 aa21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 CCDC12Q8WUD4 166 aaPredicted RBP21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 GTF3C6Q969F1 213 aa21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 GLT8D2Q9H1C3 349 aa21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 Q9Y3F1 56 aa21.84■■□□□ 1.09
SLC46A1-203ENST00000582590 SPDYE3A6NKU9 549 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms