RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 VWA3BQ502W6 1294 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 SPATS2Q86XZ4 545 aaKnown RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 PSMB7Q99436 277 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 TRIM9Q9C026 710 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 EHD4Q9H223 541 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 ARHGAP20Q9P2F6 1191 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 PCDHA6Q9UN73 950 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 PCDHA8Q9Y5H6 950 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 GRIN2DO15399 1336 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 ITGB4P16144 1822 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 LCA5LO95447 670 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 CXCR5P32302 372 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 MRPS25P82663 173 aaKnown RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 SETQ01105 290 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 APBA1Q02410 837 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 STK4Q13043 487 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 CFAP221Q4G0U5 840 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 CFAP58Q5T655 872 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 HAUS3Q68CZ6 603 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 TTC19Q6DKK2 380 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 MICALCLQ6ZW33 695 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 NOX5Q96PH1 765 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 C7orf25Q9BPX7 421 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 FAM207AQ9NSI2 230 aaPredicted RBP9.45□□□□□ -0.9
RIOK3-204ENST00000581220 ATP8A2Q9NTI2 1148 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 RNF14Q9UBS8 474 aa9.45□□□□□ -0.9
RIOK3-204ENST00000581220 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 CICQ96RK0 1608 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 UBE4AQ14139 1066 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 R3HDM1Q15032 1099 aaKnown RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 TTMPQ5BVD1 217 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 TMED8Q6PL24 325 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 RRAGAQ7L523 313 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 HEATR3Q7Z4Q2 680 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 CCDC91Q7Z6B0 441 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 ARL8AQ96BM9 186 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 NDST4Q9H3R1 872 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 GEMIN8Q9NWZ8 242 aaKnown RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 ARPP21Q9UBL0 812 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 H0YHG0 523 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 OR52Z1P0C646 297 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 FCER1AP12319 257 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 MNAT1P51948 309 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 PAK2Q13177 524 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 MAN2A1Q16706 1144 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 TXNRD1Q16881 649 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 KRT27Q7Z3Y8 459 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 RNF10Q8N5U6 811 aaKnown RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 DAGLBQ8NCG7 672 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 CALML4Q96GE6 196 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 ZIM3Q96PE6 472 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 DCP1AQ9NPI6 582 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 LUC7LQ9NQ29 371 aaKnown RBP9.44□□□□□ -0.9
RIOK3-204ENST00000581220 MYH1P12882 1939 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 CACNA1SQ13698 1873 aa9.44□□□□□ -0.9
RIOK3-204ENST00000581220 ATXN2Q99700 1313 aaKnown RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 LRRC53A6NM62 1247 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 M0R2N6 131 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 PJA2O43164 708 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 NCK2O43639 380 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 ZEB2O60315 1214 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 HNRNPH1P31943 449 aaKnown RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 PDCLQ13371 301 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 VPS72Q15906 364 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 COBLL1Q53SF7 1204 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 DGKHQ86XP1 1220 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 CCDC43Q96MW1 224 aaKnown RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 RBM12Q9NTZ6 932 aaKnown RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 SIK3Q9Y2K2 1263 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 A0A1B0GUL6 1792 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 THSD7AQ9UPZ6 1657 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 BCL9O00512 1426 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 CCNT1O60563 726 aaKnown RBP9.43□□□□□ -0.9
RIOK3-204ENST00000581220 CLSTN1O94985 981 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 TFAP4Q01664 338 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 RASSF7Q02833 373 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 SBK1Q52WX2 424 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 KCTD16Q68DU8 428 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 CENPPQ6IPU0 288 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 SV2BQ7L1I2 683 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 STAG2Q8N3U4 1231 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 ANKRD13CQ8N6S4 541 aa9.43□□□□□ -0.9
RIOK3-204ENST00000581220 IFT81Q8WYA0 676 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms