RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 WDR33Q9C0J8 1336 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 TIAM2Q8IVF5 1701 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 PTPDC1A2A3K4 754 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 FAM181BA6NEQ2 426 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 RANBP6O60518 1105 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 NMT2O60551 498 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ICMTO60725 284 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 WDHD1O75717 1129 aaPredicted RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 PCP11498 1178 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 RXRAP19793 462 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 CDC27P30260 824 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 CRKP46108 304 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 EIF1AXP47813 144 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 PCBP4P57723 403 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 DALRD3Q5D0E6 543 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 FAM47AQ5JRC9 791 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 LARP1BQ659C4 914 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 APOA5Q6Q788 366 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 FCHSD1Q86WN1 690 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 KIAA0825Q8IV33 1275 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ZFPM1Q8IX07 1006 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 CMTR1Q8N1G2 835 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ENAHQ8N8S7 591 aaPredicted RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 SLC44A5Q8NCS7 719 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ESR2Q92731 530 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 GBP4Q96PP9 640 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 GMLQ99445 158 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 NOL10Q9BSC4 688 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 MTA3Q9BTC8 594 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 MYL10Q9BUA6 226 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 DDX4Q9NQI0 724 aaKnown RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ENAMQ9NRM1 1142 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 USP40Q9NVE5 1235 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 ARPP21Q9UBL0 812 aaPredicted RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 PPP1R1BQ9UD71 204 aaPredicted RBP7.28□□□□□ -1.24
PTPRM-213ENST00000580949 USP20Q9Y2K6 914 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 CD2APQ9Y5K6 639 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
PTPRM-213ENST00000580949 FLT1P17948 1338 aa7.27□□□□□ -1.24
PTPRM-213ENST00000580949 LAMA4Q16363 1823 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 MYH13Q9UKX3 1938 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 NFKBIEO00221 500 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 XYLBO75191 536 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 RAD17O75943 681 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 F13A1P00488 732 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 VIL1P09327 827 aaKnown RBP7.27□□□□□ -1.25
PTPRM-213ENST00000580949 EPXP11678 715 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 PRELPP51888 382 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 HDLBPQ00341 1268 aaKnown RBP7.27□□□□□ -1.25
PTPRM-213ENST00000580949 KCNA1Q09470 495 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 NFIAQ12857 509 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 WTAPQ15007 396 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 NTRK3Q16288 839 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 FOXD4L6Q3SYB3 417 aaPredicted RBP7.27□□□□□ -1.25
PTPRM-213ENST00000580949 TMCO4Q5TGY1 634 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 MCTP1Q6DN14 999 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 RCSD1Q6JBY9 416 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 FOXD4L3Q6VB84 417 aaPredicted RBP7.27□□□□□ -1.25
PTPRM-213ENST00000580949 NFXL1Q6ZNB6 911 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
PTPRM-213ENST00000580949 CDC37L1Q7L3B6 337 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 CERS3Q8IU89 383 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 CCDC144CPQ8IYA2 1237 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 NLGN2Q8NFZ4 835 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 GPR152Q8TDT2 470 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 EDARADDQ8WWZ3 215 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 BHMTQ93088 406 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 TEKT1Q969V4 418 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 ZDHHC15Q96MV8 337 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 PNMA5Q96PV4 448 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 MDFIQ99750 246 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 IL17RBQ9NRM6 502 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 LMBRD1Q9NUN5 540 aa7.27□□□□□ -1.25
PTPRM-213ENST00000580949 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.27□□□□□ -1.25
PTPRM-213ENST00000580949 MAST2Q6P0Q8 1798 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 ROBO3Q96MS0 1386 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 VPS37CA5D8V6 355 aaPredicted RBP7.26□□□□□ -1.25
PTPRM-213ENST00000580949 ADARB2-AS1A8MUL3 147 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 UBE2Q2LH0YL09 131 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 PSMD14O00487 310 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 ZBTB43O43298 467 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 PRPF40AO75400 957 aaKnown RBP7.26□□□□□ -1.25
PTPRM-213ENST00000580949 MAP3K6O95382 1288 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 POLR3DP05423 398 aaPredicted RBP7.26□□□□□ -1.25
PTPRM-213ENST00000580949 SLC3A2P08195 630 aaKnown RBP7.26□□□□□ -1.25
PTPRM-213ENST00000580949 PDCP20941 246 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 CDK8P49336 464 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 CACNB3P54284 484 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 TFAP4Q01664 338 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 PDE4BQ07343 736 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 OTUD7BQ6GQQ9 843 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 FAM173BQ6P4H8 233 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 C16orf86Q6ZW13 317 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 RAB44Q7Z6P3 723 aaPredicted RBP7.26□□□□□ -1.25
PTPRM-213ENST00000580949 FERMT3Q86UX7 667 aa7.26□□□□□ -1.25
PTPRM-213ENST00000580949 ATCAYQ86WG3 371 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms