RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FGD4Q96M96 766 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 PRDM5Q9NQX1 630 aaPredicted RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 STARD7Q9NQZ5 370 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 PHF24Q9UPV7 400 aa7.56□□□□□ -1.2
TRAF4-213ENST00000578917 GREB1LQ9C091 1923 aaPredicted RBP7.56□□□□□ -1.2
TRAF4-213ENST00000578917 MGAMO43451 1857 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 A0A1W2PQ45 241 aaPredicted RBP7.55□□□□□ -1.2
TRAF4-213ENST00000578917 A0A1W2PQY0 241 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 MOXD2PA6NHM9 499 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 CPLX1O14810 134 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 MYL3P08590 195 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 RPS6KB1P23443 525 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 CCND2P30279 289 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 CPT1AP50416 773 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 HSD17B4P51659 736 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 GJA9P57773 515 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 RTP1P59025 263 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 TLE2Q04725 743 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 COL9A3Q14050 684 aaPredicted RBP7.55□□□□□ -1.2
TRAF4-213ENST00000578917 DUSP28Q4G0W2 176 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 TAPT1Q6NXT6 567 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 CXCL17Q6UXB2 119 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 TMTC3Q6ZXV5 915 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 RUFY3Q7L099 469 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 OR6J1Q8NGC5 347 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 MORC4Q8TE76 937 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 KCNB2Q92953 911 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 UPF3BQ9BZI7 483 aaKnown RBP7.55□□□□□ -1.2
TRAF4-213ENST00000578917 PXMP2Q9NR77 195 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 PDRG1Q9NUG6 133 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 COLQQ9Y215 455 aaPredicted RBP7.55□□□□□ -1.2
TRAF4-213ENST00000578917 Q9Y3F1 56 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 MRVI1Q9Y6F6 885 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 DNAH12Q6ZR08 3092 aa7.55□□□□□ -1.2
TRAF4-213ENST00000578917 ASTN1O14525 1302 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 ELP1O95163 1332 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 RLFQ13129 1914 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 MYH4Q9Y623 1939 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 MYADML2A6NDP7 307 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 SPDYE3A6NKU9 549 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 NKRFO15226 690 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 ADCY6O43306 1168 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 ADAMTS4O75173 837 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 CABYRO75952 493 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 ADD1P35611 737 aaKnown RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 NAPAP54920 295 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 IRX5P78411 483 aaPredicted RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 LY6KQ17RY6 165 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 SLC35G1Q2M3R5 365 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 TRIM60Q495X7 471 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 KCNV1Q6PIU1 500 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 CPLX2Q6PUV4 134 aaKnown RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 USP17L6PQ6QN14 398 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 VSIG10LQ86VR7 867 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 DHX37Q8IY37 1157 aaKnown RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 PIAS4Q8N2W9 510 aaPredicted RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 KLHDC9Q8NEP7 349 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 GPKOWQ92917 476 aaPredicted RBP eCLIP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 ZFP91Q96JP5 570 aaPredicted RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 KATNBL1Q9H079 304 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 UPF3AQ9H1J1 476 aaKnown RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 EHMT1Q9H9B1 1298 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 RTEL1Q9NZ71 1219 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 COL20A1Q9P218 1284 aa7.54□□□□□ -1.2
TRAF4-213ENST00000578917 GNEQ9Y223 722 aaKnown RBP7.54□□□□□ -1.2
TRAF4-213ENST00000578917 A0A0U1RQG5 324 aaPredicted RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 SMCO2A6NFE2 343 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 OPLAHO14841 1288 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 TLR3O15455 904 aaKnown RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 SORBS3O60504 671 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 KPNA6O60684 536 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 GH1P01241 217 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 RAG1P15918 1043 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 PTGS1P23219 599 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 EDNRBP24530 442 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 CST5P28325 142 aaPredicted RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 RCAN1P53805 252 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 CCT2P78371 535 aaKnown RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 STK3Q13188 491 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 PGM5Q15124 567 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 GNPTABQ3T906 1256 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 TMEM63BQ5T3F8 832 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 CCDC12Q8WUD4 166 aaPredicted RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 PDCD2LQ9BRP1 358 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 LARP6Q9BRS8 491 aaKnown RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 TM6SF1Q9BZW5 370 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
TRAF4-213ENST00000578917 GLT8D2Q9H1C3 349 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 MLXIPQ9HAP2 919 aa7.53□□□□□ -1.2
TRAF4-213ENST00000578917 A0A0G2JMZ2 1700 aa7.52□□□□□ -1.2
TRAF4-213ENST00000578917 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms