RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 FGD4Q96M96 766 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 C6orf50Q9HD87 102 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 VTA1Q9NP79 307 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 SH3GLB2Q9NR46 395 aa13.25□□□□□ -0.29
ERBB2-208ENST00000578630 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
ERBB2-208ENST00000578630 ZHX1Q9UKY1 873 aaPredicted RBP13.25□□□□□ -0.29
ERBB2-208ENST00000578630 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 STXBP3O00186 592 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 MEIS2O14770 477 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 PPFIA3O75145 1194 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 FOSP01100 380 aaPredicted RBP13.24□□□□□ -0.29
ERBB2-208ENST00000578630 NR3C2P08235 984 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 ZNF865P0CJ78 1059 aaPredicted RBP13.24□□□□□ -0.29
ERBB2-208ENST00000578630 ADCY7P51828 1080 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 SOX10P56693 466 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 MCTP2Q6DN12 878 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 EEPD1Q7L9B9 569 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 FAM177A1Q8N128 213 aaPredicted RBP13.24□□□□□ -0.29
ERBB2-208ENST00000578630 TRPV1Q8NER1 839 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
ERBB2-208ENST00000578630 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
ERBB2-208ENST00000578630 MYH6P13533 1939 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 ZNF236Q9UL36 1845 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
ERBB2-208ENST00000578630 RARBP10826 455 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
ERBB2-208ENST00000578630 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-208ENST00000578630 EDNRBP24530 442 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 NLRP5P59047 1200 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 SPC25Q9HBM1 224 aa13.23□□□□□ -0.29
ERBB2-208ENST00000578630 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-208ENST00000578630 ASTN1O14525 1302 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 STAM2O75886 525 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 MYCLP12524 364 aaPredicted RBP13.22□□□□□ -0.29
ERBB2-208ENST00000578630 CCND2P30279 289 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 TNFAIP2Q03169 654 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 LHX8Q68G74 356 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 GALNT17Q6IS24 598 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 XRRA1Q6P2D8 792 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 ANKLE1Q8NAG6 615 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
ERBB2-208ENST00000578630 OGDHLQ9ULD0 1010 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
ERBB2-208ENST00000578630 STK36Q9NRP7 1315 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 DUSP11O75319 330 aaKnown RBP13.21□□□□□ -0.29
ERBB2-208ENST00000578630 LARGE1O95461 756 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 CTDNEP1O95476 244 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 PGM5Q15124 567 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 TAPT1Q6NXT6 567 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 Q9Y3F1 56 aa13.21□□□□□ -0.29
ERBB2-208ENST00000578630 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
ERBB2-208ENST00000578630 NKRFO15226 690 aaKnown RBP eCLIP13.2□□□□□ -0.3
ERBB2-208ENST00000578630 ADCYAP1R1P41586 468 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
ERBB2-208ENST00000578630 TRIM29Q14134 588 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 UBE2SQ16763 222 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 GNPTABQ3T906 1256 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 ANO1Q5XXA6 986 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 RNF180Q86T96 592 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-208ENST00000578630 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
ERBB2-208ENST00000578630 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 XPNPEP3Q9NQH7 507 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
ERBB2-208ENST00000578630 PLXNA1Q9UIW2 1896 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
ERBB2-208ENST00000578630 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
ERBB2-208ENST00000578630 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
ERBB2-208ENST00000578630 TGFB3P10600 412 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 DUSP28Q4G0W2 176 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
ERBB2-208ENST00000578630 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms