RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 KATNBL1Q9H079 304 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 RIOX1Q9H6W3 641 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 Q9Y3F1 56 aa14.83□□□□□ -0.04
CCDC57-211ENST00000578187 DHX16O60231 1041 aaKnown RBP14.82□□□□□ -0.04
CCDC57-211ENST00000578187 CALM1P0DP23 149 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 CALM2P0DP24 149 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 CALM3P0DP25 149 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 NKX3-2P78367 333 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.044e-15■■■□□ 16.1
CCDC57-211ENST00000578187 BAATQ14032 418 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-211ENST00000578187 QRICH1Q2TAL8 776 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 BLOC1S2Q6QNY1 142 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 RNF207Q6ZRF8 634 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 EEPD1Q7L9B9 569 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-211ENST00000578187 TMEM199Q8N511 208 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-211ENST00000578187 CLEC4DQ8WXI8 215 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 FAM161BQ96MY7 647 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 SLC12A7Q9Y666 1083 aa14.82□□□□□ -0.04
CCDC57-211ENST00000578187 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-211ENST00000578187 NFIBO00712 420 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 DYNC1LI2O43237 492 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-211ENST00000578187 CYTH3O43739 400 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
CCDC57-211ENST00000578187 CPA1P15085 419 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 RPS6KB1P23443 525 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 CALML3P27482 149 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 PSMA5P28066 241 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 KIF5BP33176 963 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 CDK7P50613 346 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 ALDH5A1P51649 535 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-211ENST00000578187 BEX3Q00994 111 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 BRDTQ58F21 947 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-211ENST00000578187 MFSD5Q6N075 450 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 APOA5Q6Q788 366 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 FBXL16Q8N461 479 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 SPZ1Q9BXG8 430 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 TBX21Q9UL17 535 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 GNEQ9Y223 722 aaKnown RBP14.81□□□□□ -0.04
CCDC57-211ENST00000578187 ABCB11O95342 1321 aa14.81□□□□□ -0.04
CCDC57-211ENST00000578187 TMEM265A0A087WTH1 108 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 ZBTB5O15062 677 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 PPP1R11O60927 126 aaPredicted RBP14.8□□□□□ -0.04
CCDC57-211ENST00000578187 SMPD1P17405 629 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 CASTP20810 708 aaKnown RBP14.8□□□□□ -0.04
CCDC57-211ENST00000578187 ITGB8P26012 769 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 SMARCA1P28370 1054 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 GNAQP50148 359 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 CPT1AP50416 773 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 RCAN1P53805 252 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 PDE4DQ08499 809 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 USH1GQ495M9 461 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 MICU3Q86XE3 530 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 FBXO11Q86XK2 927 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 FAM126BQ8IXS8 530 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 MORC4Q8TE76 937 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 AGXT2Q9BYV1 514 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 TM6SF1Q9BZW5 370 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 VAT1LQ9HCJ6 419 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 NID2Q14112 1375 aa14.8□□□□□ -0.04
CCDC57-211ENST00000578187 ASTN1O14525 1302 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 COL6A3P12111 3177 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 RXRAP19793 462 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 ITGA7Q13683 1181 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 C8orf34Q49A92 452 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 TAPT1Q6NXT6 567 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 PSRC1Q6PGN9 363 aaPredicted RBP14.79□□□□□ -0.04
CCDC57-211ENST00000578187 SLC30A10Q6XR72 485 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 Q6ZUG5 572 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 DNERQ8NFT8 737 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 IL17RAQ96F46 866 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 LZTS2Q9BRK4 669 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 AMNQ9BXJ7 453 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 WDR11Q9BZH6 1224 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 MAF1Q9H063 256 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 MTIF3Q9H2K0 278 aaKnown RBP14.79□□□□□ -0.04
CCDC57-211ENST00000578187 ZSWIM6Q9HCJ5 1215 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 POLR3EQ9NVU0 708 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 BRPF3Q9ULD4 1205 aa14.79□□□□□ -0.04
CCDC57-211ENST00000578187 KLF18A0A0U1RQI7 1052 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.78□□□□□ -0.04
CCDC57-211ENST00000578187 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.78□□□□□ -0.04
CCDC57-211ENST00000578187 DLL1O00548 723 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 NKRFO15226 690 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCDC57-211ENST00000578187 CTAGE5O15320 804 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 ZBTB43O43298 467 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 ANAPC15P60006 121 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 IRX5P78411 483 aaPredicted RBP14.78□□□□□ -0.04
CCDC57-211ENST00000578187 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 TMTC3Q6ZXV5 915 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 HOMER1Q86YM7 354 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 RAB11FIP4Q86YS3 637 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 SRBD1Q8N5C6 995 aaKnown RBP14.78□□□□□ -0.04
CCDC57-211ENST00000578187 FANCBQ8NB91 859 aa14.78□□□□□ -0.04
CCDC57-211ENST00000578187 RGS22Q8NE09 1264 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms