RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 DUSP11O75319 330 aaKnown RBP25.61■■□□□ 1.69
SMARCD2-206ENST00000577990 POLR2MP0CAP2 368 aa25.61■■□□□ 1.69
SMARCD2-206ENST00000577990 LRRC41Q15345 812 aa25.61■■□□□ 1.69
SMARCD2-206ENST00000577990 GJC2Q5T442 439 aaPredicted RBP25.61■■□□□ 1.69
SMARCD2-206ENST00000577990 IL17RAQ96F46 866 aa25.61■■□□□ 1.69
SMARCD2-206ENST00000577990 KBTBD13C9JR72 458 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 ADCY6O43306 1168 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 PGK1P00558 417 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 MYCNP04198 464 aaPredicted RBP25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 SYN1P17600 705 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 HOXA13P31271 388 aaPredicted RBP25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 ADD1P35611 737 aaKnown RBP25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 ADCYAP1R1P41586 468 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 TAPT1Q6NXT6 567 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 SYNRGQ9UMZ2 1314 aa25.6■■□□□ 1.69
SMARCD2-206ENST00000577990 TNFAIP2Q03169 654 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 LRRC26Q2I0M4 334 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 ARHGEF16Q5VV41 709 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 RNF180Q86T96 592 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 IWS1Q96ST2 819 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 PXMP2Q9NR77 195 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 PDGFCQ9NRA1 345 aa25.59■■□□□ 1.69
SMARCD2-206ENST00000577990 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.58■■□□□ 1.69
SMARCD2-206ENST00000577990 ADAMTS4O75173 837 aa25.58■■□□□ 1.69
SMARCD2-206ENST00000577990 PDIA3P30101 505 aaKnown RBP25.58■■□□□ 1.69
SMARCD2-206ENST00000577990 IQSEC1Q6DN90 963 aa25.58■■□□□ 1.69
SMARCD2-206ENST00000577990 HEATR3Q7Z4Q2 680 aa25.58■■□□□ 1.69
SMARCD2-206ENST00000577990 V9GY48 417 aaPredicted RBP25.58■■□□□ 1.69
SMARCD2-206ENST00000577990 EIF2AK2P19525 551 aaKnown RBP25.57■■□□□ 1.68
SMARCD2-206ENST00000577990 NOL8Q76FK4 1167 aaKnown RBP25.57■■□□□ 1.68
SMARCD2-206ENST00000577990 GPKOWQ92917 476 aaPredicted RBP eCLIP25.57■■□□□ 1.68
SMARCD2-206ENST00000577990 SENP6Q9GZR1 1112 aaPredicted RBP25.57■■□□□ 1.68
SMARCD2-206ENST00000577990 UPF3AQ9H1J1 476 aaKnown RBP25.57■■□□□ 1.68
SMARCD2-206ENST00000577990 RBM47A0AV96 593 aaKnown RBP25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 SMPD1P17405 629 aa25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 FCHSD1Q86WN1 690 aa25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 CUL5Q93034 780 aa25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 ZNF274Q96GC6 653 aaPredicted RBP25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 SPC25Q9HBM1 224 aa25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 GNEQ9Y223 722 aaKnown RBP25.56■■□□□ 1.68
SMARCD2-206ENST00000577990 NR3C2P08235 984 aa25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 ATN1P54259 1190 aaPredicted RBP25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 GJA9P57773 515 aa25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 CCT2P78371 535 aaKnown RBP25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 STXBP2Q15833 593 aa25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 WWC2Q6AWC2 1192 aa25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 KLHDC9Q8NEP7 349 aa25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 PDCD2LQ9BRP1 358 aa25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 LARP6Q9BRS8 491 aaKnown RBP25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 ALDH8A1Q9H2A2 487 aaPredicted RBP25.55■■□□□ 1.68
SMARCD2-206ENST00000577990 hCG_1984214I3L0E3 225 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 PIK3CDO00329 1044 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 C6orf222P0C671 652 aaPredicted RBP25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 TLK2Q86UE8 772 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 ZNF713Q8N859 430 aaPredicted RBP25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 SMARCC2Q8TAQ2 1214 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 SCFD2Q8WU76 684 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 WDR11Q9BZH6 1224 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 PSTPIP2Q9H939 334 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 NCOA5Q9HCD5 579 aaKnown RBP25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 PHF24Q9UPV7 400 aa25.54■■□□□ 1.68
SMARCD2-206ENST00000577990 MYADML2A6NDP7 307 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 MEIS2O14770 477 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 CST5P28325 142 aaPredicted RBP25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 NTRK3Q16288 839 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 DUSP28Q4G0W2 176 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 PPP1R18Q6NYC8 613 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 USP17L6PQ6QN14 398 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 TSEN34Q9BSV6 310 aaKnown RBP25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 Q9Y3F1 56 aa25.53■■□□□ 1.68
SMARCD2-206ENST00000577990 NAPAP54920 295 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 NKX3-2P78367 333 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 PGM5Q15124 567 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 PFKFB3Q16875 520 aaPredicted RBP25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 TMEM63BQ5T3F8 832 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 GDF15Q99988 308 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 AP5M1Q9H0R1 490 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 BARHL2Q9NY43 387 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 GTF3C3Q9Y5Q9 886 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 FRMPD4Q14CM0 1322 aa25.52■■□□□ 1.68
SMARCD2-206ENST00000577990 KIAA1217Q5T5P2 1943 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 STXBP3O00186 592 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 DYNC1LI2O43237 492 aaPredicted RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 PRPF3O43395 683 aaKnown RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 EIF3JO75822 258 aaKnown RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 MYCLP12524 364 aaPredicted RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 IFNAR1P17181 557 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 PTGS1P23219 599 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 MAGEA10P43363 369 aaPredicted RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 IRX5P78411 483 aaPredicted RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 ANKRD1Q15327 319 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 CCSAPQ6IQ19 270 aaPredicted RBP25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 TYW1BQ6NUM6 668 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 SEPT14Q6ZU15 432 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 IL31RAQ8NI17 732 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 PHKBQ93100 1093 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 FERMT2Q96AC1 680 aa25.51■■□□□ 1.67
SMARCD2-206ENST00000577990 MOXD2PA6NHM9 499 aa25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 NKRFO15226 690 aaKnown RBP eCLIP25.5■■□□□ 1.67
SMARCD2-206ENST00000577990 CTAGE5O15320 804 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms