RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 COPS5Q92905 334 aa13.86□□□□□ -0.19
CDH8-202ENST00000577228 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
CDH8-202ENST00000577228 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
CDH8-202ENST00000577228 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 SCN10AQ9Y5Y9 1956 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 A6NJR5 290 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 TRIM6-TRIM34B2RNG4 842 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 GOLGA8HP0CJ92 632 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 TXNP10599 105 aaKnown RBP13.85□□□□□ -0.19
CDH8-202ENST00000577228 PTPN11Q06124 597 aaPredicted RBP13.85□□□□□ -0.19
CDH8-202ENST00000577228 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
CDH8-202ENST00000577228 USH1GQ495M9 461 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 GPATCH4Q5T3I0 446 aaKnown RBP13.85□□□□□ -0.19
CDH8-202ENST00000577228 ESR2Q92731 530 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 SLC9A7Q96T83 725 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 UHRF1Q96T88 793 aaPredicted RBP13.85□□□□□ -0.19
CDH8-202ENST00000577228 NOD1Q9Y239 953 aa13.85□□□□□ -0.19
CDH8-202ENST00000577228 CA3P07451 260 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
CDH8-202ENST00000577228 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 BFSP2Q13515 415 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 FTOQ9C0B1 505 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDH8-202ENST00000577228 NEDD4P46934 1319 aa13.84□□□□□ -0.19
CDH8-202ENST00000577228 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
CDH8-202ENST00000577228 ARIH2O95376 493 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
CDH8-202ENST00000577228 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
CDH8-202ENST00000577228 DGKHQ86XP1 1220 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 PHOSPHO2Q8TCD6 241 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 UBA5Q9GZZ9 404 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
CDH8-202ENST00000577228 TANC1Q9C0D5 1861 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 GH1P01241 217 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 COL9A1P20849 921 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 PTGISQ16647 500 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 CCDC62Q6P9F0 684 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 HERC6Q8IVU3 1022 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 PNMA1Q8ND90 353 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 MAF1Q9H063 256 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 CERS4Q9HA82 394 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 ABCB11O95342 1321 aa13.82□□□□□ -0.2
CDH8-202ENST00000577228 NCOR1O75376 2440 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 KIF28PB7ZC32 967 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 RFXAPO00287 272 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 ZNF213O14771 459 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 KDM4AO75164 1064 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 MMP3P08254 477 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 SDSP20132 328 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 KCNJ6P48051 423 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 NT5C2P49902 561 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 ARHGAP1Q07960 439 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 AAK1Q2M2I8 961 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 SEPT14Q6ZU15 432 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 CAGE1Q8TC20 777 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 SYTL5Q8TDW5 730 aaPredicted RBP13.81□□□□□ -0.2
CDH8-202ENST00000577228 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
CDH8-202ENST00000577228 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 MTCH2Q9Y6C9 303 aa13.81□□□□□ -0.2
CDH8-202ENST00000577228 EPOPA6NHQ4 379 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
CDH8-202ENST00000577228 POU3F3P20264 500 aaPredicted RBP13.8□□□□□ -0.2
CDH8-202ENST00000577228 TFF2Q03403 129 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 TAP1Q03518 808 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 STXBP2Q15833 593 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 LY6KQ17RY6 165 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 ASPRV1Q53RT3 343 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 GDF6Q6KF10 455 aaPredicted RBP13.8□□□□□ -0.2
CDH8-202ENST00000577228 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 SESTD1Q86VW0 696 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 MCF2L2Q86YR7 1114 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 AFAP1L1Q8TED9 768 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 ARNTL2Q8WYA1 636 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 IWS1Q96ST2 819 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 RMDN3Q96TC7 470 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 CHD7Q9P2D1 2997 aa13.8□□□□□ -0.2
CDH8-202ENST00000577228 PRRC2BQ5JSZ5 2229 aaKnown RBP13.79□□□□□ -0.2
CDH8-202ENST00000577228 B4E1Z4 1266 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 ARHGEF15O94989 841 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 BMP1P13497 986 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 SELPP16109 830 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
CDH8-202ENST00000577228 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
CDH8-202ENST00000577228 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms