RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 Q9Y3F1 56 aa27.14■■□□□ 1.94
SNF8-217ENST00000576353 MOXD2PA6NHM9 499 aa27.13■■□□□ 1.93
SNF8-217ENST00000576353 HOXA13P31271 388 aaPredicted RBP27.13■■□□□ 1.93
SNF8-217ENST00000576353 ATN1P54259 1190 aaPredicted RBP27.13■■□□□ 1.93
SNF8-217ENST00000576353 NKX3-2P78367 333 aa27.13■■□□□ 1.93
SNF8-217ENST00000576353 STXBP2Q15833 593 aa27.13■■□□□ 1.93
SNF8-217ENST00000576353 GNASQ5JWF2 1037 aa27.13■■□□□ 1.93
SNF8-217ENST00000576353 C7orf61Q8IZ16 206 aa27.13■■□□□ 1.93
SNF8-217ENST00000576353 FERMT2Q96AC1 680 aa27.13■■□□□ 1.93
SNF8-217ENST00000576353 MCM3APO60318 1980 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 METAP2P50579 478 aaKnown RBP eCLIP27.12■■□□□ 1.93
SNF8-217ENST00000576353 KCNA10Q16322 511 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 DUSP28Q4G0W2 176 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 CCSAPQ6IQ19 270 aaPredicted RBP27.12■■□□□ 1.93
SNF8-217ENST00000576353 SLC39A5Q6ZMH5 540 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 TLK2Q86UE8 772 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 SCFD2Q8WU76 684 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 PXMP2Q9NR77 195 aa27.12■■□□□ 1.93
SNF8-217ENST00000576353 BAZ2BQ9UIF8 2168 aaKnown RBP27.12■■□□□ 1.93
SNF8-217ENST00000576353 DYNC1LI2O43237 492 aaPredicted RBP27.11■■□□□ 1.93
SNF8-217ENST00000576353 NR3C2P08235 984 aa27.11■■□□□ 1.93
SNF8-217ENST00000576353 EIF2AK2P19525 551 aaKnown RBP27.11■■□□□ 1.93
SNF8-217ENST00000576353 ACLYP53396 1101 aa27.11■■□□□ 1.93
SNF8-217ENST00000576353 CUL5Q93034 780 aa27.11■■□□□ 1.93
SNF8-217ENST00000576353 LCTP09848 1927 aa27.11■■□□□ 1.93
SNF8-217ENST00000576353 MYH6P13533 1939 aa27.11■■□□□ 1.93
SNF8-217ENST00000576353 MYADML2A6NDP7 307 aa27.1■■□□□ 1.93
SNF8-217ENST00000576353 EIF3JO75822 258 aaKnown RBP27.1■■□□□ 1.93
SNF8-217ENST00000576353 FAM217BQ9NTX9 383 aaPredicted RBP27.1■■□□□ 1.93
SNF8-217ENST00000576353 A0A1W2PQ45 241 aaPredicted RBP27.09■■□□□ 1.93
SNF8-217ENST00000576353 A0A1W2PQY0 241 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 hCG_1642624A0A1W2PR95 340 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 NKRFO15226 690 aaKnown RBP eCLIP27.09■■□□□ 1.93
SNF8-217ENST00000576353 CDC27P30260 824 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 ANAPC15P60006 121 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 FUT2Q10981 343 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 TTLL4Q14679 1199 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 FCHSD1Q86WN1 690 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 PDCD2LQ9BRP1 358 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 CNTNAP5Q8WYK1 1306 aa27.09■■□□□ 1.93
SNF8-217ENST00000576353 CTAGE5O15320 804 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 ZEB2O60315 1214 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 ASGR1P07306 291 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 EVCP57679 992 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 FSCN1Q16658 493 aaKnown RBP27.08■■□□□ 1.93
SNF8-217ENST00000576353 C1orf53Q5VUE5 145 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 SMARCC2Q8TAQ2 1214 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 GLT1D1Q96MS3 346 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 PSTPIP2Q9H939 334 aa27.08■■□□□ 1.93
SNF8-217ENST00000576353 V9GY48 417 aaPredicted RBP27.08■■□□□ 1.93
SNF8-217ENST00000576353 PIK3CDO00329 1044 aa27.07■■□□□ 1.92
SNF8-217ENST00000576353 TXNP10599 105 aaKnown RBP27.07■■□□□ 1.92
SNF8-217ENST00000576353 ADD1P35611 737 aaKnown RBP27.07■■□□□ 1.92
SNF8-217ENST00000576353 RTP1P59025 263 aa27.07■■□□□ 1.92
SNF8-217ENST00000576353 IRX5P78411 483 aaPredicted RBP27.07■■□□□ 1.92
SNF8-217ENST00000576353 SNX17Q15036 470 aa27.07■■□□□ 1.92
SNF8-217ENST00000576353 TMEM63BQ5T3F8 832 aa27.07■■□□□ 1.92
SNF8-217ENST00000576353 HEATR3Q7Z4Q2 680 aa27.07■■□□□ 1.92
SNF8-217ENST00000576353 UPF3BQ9BZI7 483 aaKnown RBP27.07■■□□□ 1.92
SNF8-217ENST00000576353 STARD7Q9NQZ5 370 aa27.07■■□□□ 1.92
SNF8-217ENST00000576353 BEX3Q00994 111 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 PGM5Q15124 567 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 SEPT14Q6ZU15 432 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 VSIG10LQ86VR7 867 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 PDRG1Q9NUG6 133 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 ATP11BQ9Y2G3 1177 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 ELP1O95163 1332 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 NID2Q14112 1375 aa27.06■■□□□ 1.92
SNF8-217ENST00000576353 hCG_1984214I3L0E3 225 aa27.05■■□□□ 1.92
SNF8-217ENST00000576353 CABYRO75952 493 aa27.05■■□□□ 1.92
SNF8-217ENST00000576353 MYCLP12524 364 aaPredicted RBP27.05■■□□□ 1.92
SNF8-217ENST00000576353 PDIA3P30101 505 aaKnown RBP27.05■■□□□ 1.92
SNF8-217ENST00000576353 CCND2P30279 289 aa27.05■■□□□ 1.92
SNF8-217ENST00000576353 TOB2Q14106 344 aaPredicted RBP27.05■■□□□ 1.92
SNF8-217ENST00000576353 ZNF713Q8N859 430 aaPredicted RBP27.05■■□□□ 1.92
SNF8-217ENST00000576353 VTI1AQ96AJ9 217 aa27.05■■□□□ 1.92
SNF8-217ENST00000576353 ZMYND8Q9ULU4 1186 aaPredicted RBP27.05■■□□□ 1.92
SNF8-217ENST00000576353 LRRC37A2A6NM11 1700 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 MEIS2O14770 477 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 CPT1AP50416 773 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 TRIM60Q495X7 471 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 BRDTQ58F21 947 aaPredicted RBP27.04■■□□□ 1.92
SNF8-217ENST00000576353 CCDC62Q6P9F0 684 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 USP17L6PQ6QN14 398 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 TEX2Q8IWB9 1127 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 OR6J1Q8NGC5 347 aa27.04■■□□□ 1.92
SNF8-217ENST00000576353 GPKOWQ92917 476 aaPredicted RBP eCLIP27.04■■□□□ 1.92
SNF8-217ENST00000576353 RBM27Q9P2N5 1060 aaKnown RBP27.04■■□□□ 1.92
SNF8-217ENST00000576353 PTGS1P23219 599 aa27.03■■□□□ 1.92
SNF8-217ENST00000576353 WWC2Q6AWC2 1192 aa27.03■■□□□ 1.92
SNF8-217ENST00000576353 PPP1R18Q6NYC8 613 aa27.03■■□□□ 1.92
SNF8-217ENST00000576353 ZNF274Q96GC6 653 aaPredicted RBP27.03■■□□□ 1.92
SNF8-217ENST00000576353 NAPAP54920 295 aa27.02■■□□□ 1.92
SNF8-217ENST00000576353 KCNV1Q6PIU1 500 aa27.02■■□□□ 1.92
SNF8-217ENST00000576353 PRKAG2Q9UGJ0 569 aa27.02■■□□□ 1.92
SNF8-217ENST00000576353 CEP290O15078 2479 aa27.01■■□□□ 1.92
SNF8-217ENST00000576353 FRMPD4Q14CM0 1322 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 STAM2O75886 525 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 ARIH2O95376 493 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 SYN1P17600 705 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms