RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
TSR1-204ENST00000576112 PCDHA11Q9Y5I1 949 aa17.25■□□□□ 0.35
TSR1-204ENST00000576112 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
TSR1-204ENST00000576112 RPUSD2Q8IZ73 545 aaKnown RBP17.24■□□□□ 0.35
TSR1-204ENST00000576112 MICALL1Q8N3F8 863 aa17.24■□□□□ 0.35
TSR1-204ENST00000576112 ATXN2LQ8WWM7 1075 aaKnown RBP17.24■□□□□ 0.35
TSR1-204ENST00000576112 ZBTB47Q9UFB7 747 aaPredicted RBP17.24■□□□□ 0.35
TSR1-204ENST00000576112 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 A6NJR5 290 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 RFXAPO00287 272 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 CA3P07451 260 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 MFSD6Q6ZSS7 791 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 DNERQ8NFT8 737 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 ADAMTS19Q8TE59 1207 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
TSR1-204ENST00000576112 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 PFKMP08237 780 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
TSR1-204ENST00000576112 CDC37Q16543 378 aaPredicted RBP17.22■□□□□ 0.35
TSR1-204ENST00000576112 NFRKBQ6P4R8 1299 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 TTC14Q96N46 770 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 CERS4Q9HA82 394 aa17.22■□□□□ 0.35
TSR1-204ENST00000576112 GPHNQ9NQX3 736 aaPredicted RBP17.22■□□□□ 0.35
TSR1-204ENST00000576112 RAD50Q92878 1312 aa17.21■□□□□ 0.35
TSR1-204ENST00000576112 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSR1-204ENST00000576112 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
TSR1-204ENST00000576112 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
TSR1-204ENST00000576112 MRPS5P82675 430 aaKnown RBP17.21■□□□□ 0.35
TSR1-204ENST00000576112 TFF2Q03403 129 aa17.21■□□□□ 0.35
TSR1-204ENST00000576112 KRT40Q6A162 431 aa17.21■□□□□ 0.35
TSR1-204ENST00000576112 CCDC62Q6P9F0 684 aa17.21■□□□□ 0.35
TSR1-204ENST00000576112 NECAB3Q96P71 396 aaPredicted RBP17.21■□□□□ 0.35
TSR1-204ENST00000576112 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 MMP3P08254 477 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
TSR1-204ENST00000576112 SDSP20132 328 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 LY6KQ17RY6 165 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
TSR1-204ENST00000576112 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 AFG1LQ8WV93 481 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 ESR2Q92731 530 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 UHRF1Q96T88 793 aaPredicted RBP17.2■□□□□ 0.34
TSR1-204ENST00000576112 RAPGEFL1Q9UHV5 662 aa17.2■□□□□ 0.34
TSR1-204ENST00000576112 KDM4AO75164 1064 aa17.19■□□□□ 0.34
TSR1-204ENST00000576112 TMEM67Q5HYA8 995 aa17.19■□□□□ 0.34
TSR1-204ENST00000576112 GDF6Q6KF10 455 aaPredicted RBP17.19■□□□□ 0.34
TSR1-204ENST00000576112 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
TSR1-204ENST00000576112 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
TSR1-204ENST00000576112 SYTL5Q8TDW5 730 aaPredicted RBP17.19■□□□□ 0.34
TSR1-204ENST00000576112 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
TSR1-204ENST00000576112 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
TSR1-204ENST00000576112 PNMA2Q9UL42 364 aa17.19■□□□□ 0.34
TSR1-204ENST00000576112 BRWD1Q9NSI6 2320 aa17.19■□□□□ 0.34
TSR1-204ENST00000576112 B4E1Z4 1266 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 RFC2P35250 354 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 GPNMBQ14956 572 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 TCTN1Q2MV58 587 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 QRICH1Q2TAL8 776 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
TSR1-204ENST00000576112 SEPT14Q6ZU15 432 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 TMCO2Q7Z6W1 182 aaPredicted RBP17.18■□□□□ 0.34
TSR1-204ENST00000576112 DGKHQ86XP1 1220 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 ENAHQ8N8S7 591 aaPredicted RBP17.18■□□□□ 0.34
TSR1-204ENST00000576112 RGS22Q8NE09 1264 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 KAT2BQ92831 832 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
TSR1-204ENST00000576112 MTCH2Q9Y6C9 303 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 SIP14410 1827 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 DOCK5Q9H7D0 1870 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 ABCB11O95342 1321 aa17.18■□□□□ 0.34
TSR1-204ENST00000576112 ZNF213O14771 459 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 OPLAHO14841 1288 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 KPNA6O60684 536 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 ACTN1P12814 892 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 KCNQ1P51787 676 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 TAP1Q03518 808 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 PTPN11Q06124 597 aaPredicted RBP17.17■□□□□ 0.34
TSR1-204ENST00000576112 PTGISQ16647 500 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
TSR1-204ENST00000576112 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 HERC6Q8IVU3 1022 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSR1-204ENST00000576112 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
TSR1-204ENST00000576112 LCHNA4D1U4 455 aa17.16■□□□□ 0.34
TSR1-204ENST00000576112 GH1P01241 217 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms