RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 COMMD10Q9Y6G5 202 aa10.67□□□□□ -0.7
CALCOCO2-226ENST00000575461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 KPNA1P52294 538 aaPredicted RBP10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 SESN3P58005 492 aa10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 SNRPNP63162 240 aaKnown RBP10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 PPP4R4Q6NUP7 873 aa10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 UBL7Q96S82 380 aaPredicted RBP10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 GPR62Q9BZJ7 368 aa10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 ZNF700Q9H0M5 742 aa10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 TCF7L1Q9HCS4 588 aa10.66□□□□□ -0.7
CALCOCO2-226ENST00000575461 SNUPNO95149 360 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 CT47B1P0C2W7 299 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 BMP3P12645 472 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 IFNGR1P15260 489 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 CCND1P24385 295 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 MECP2P51608 486 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 ERVK-21P61565 698 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 GRIK4Q16099 956 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 ARHGAP44Q17R89 818 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 ABCB5Q2M3G0 1257 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 CCDC103Q8IW40 242 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 CBARPQ8N350 705 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 SAMD3Q8N6K7 520 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 CHTF18Q8WVB6 975 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 FBXW5Q969U6 566 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 AHCYL2Q96HN2 611 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 MYRFLQ96LU7 910 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 NACC1Q96RE7 527 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 MMP19Q99542 508 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 SLC12A9Q9BXP2 914 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 SPTLC3Q9NUV7 552 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
CALCOCO2-226ENST00000575461 SHISA3A0PJX4 238 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 C9orf172C9J069 976 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 ARNTLO00327 626 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 IGF2BP3O00425 579 aaKnown RBP eCLIP10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 MSCO60682 206 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 LEFTY1O75610 366 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 VAV1P15498 845 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 KLF1Q13351 362 aaPredicted RBP10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 INAVAQ3KP66 663 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 ZNF385CQ66K41 422 aaPredicted RBP10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 FAM214BQ7L5A3 538 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 OVCH1Q7RTY7 1134 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 UTP4Q969X6 686 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 GPATCH2Q9NW75 528 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 IP6K2Q9UHH9 426 aa10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 LUC7L2Q9Y383 392 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-226ENST00000575461 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 SOD2P04179 222 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 FAM87AP0C7U9 286 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 SPATA31C1P0DKV0 1188 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 MYBL2P10244 700 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 PAMP19021 973 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 ST5P78524 1137 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 NFKBIBQ15653 356 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 C16orf59Q7L2K0 433 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 DGKHQ86XP1 1220 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 SVOPQ8N4V2 548 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 TCTN2Q96GX1 697 aa10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 PNMA8BQ9ULN7 279 aaPredicted RBP10.63□□□□□ -0.71
CALCOCO2-226ENST00000575461 PTPDC1A2A3K4 754 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 CCDC66A2RUB6 948 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 FAM47E-STBD1D6RA91 191 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 ZNF205O95201 554 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 LCP1P13796 627 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 NOS3P29474 1203 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 TNK2Q07912 1038 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 SLC4A10Q6U841 1118 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 FAM20CQ8IXL6 584 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 RCBTB1Q8NDN9 531 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 ANKRD6Q9Y2G4 727 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 CAPN6Q9Y6Q1 641 aa10.62□□□□□ -0.71
CALCOCO2-226ENST00000575461 MYO1BO43795 1136 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 CFBP00751 764 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 SRFP11831 508 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 GMPRP36959 345 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 RECQLP46063 649 aaPredicted RBP10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 DNM2P50570 870 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 KRT85P78386 507 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 BRD3Q15059 726 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 TMEM240Q5SV17 173 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 ZNF787Q6DD87 383 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 EFHBQ8N7U6 833 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 C2orf69Q8N8R5 385 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 FBXO41Q8TF61 875 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 SLC5A5Q92911 643 aa10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 TRIT1Q9H3H1 467 aaKnown RBP10.61□□□□□ -0.71
CALCOCO2-226ENST00000575461 NPHP3-ACAD11A0A0J9YXS1 232 aa10.6□□□□□ -0.71
CALCOCO2-226ENST00000575461 PRPF3O43395 683 aaKnown RBP10.6□□□□□ -0.71
CALCOCO2-226ENST00000575461 GSTM1P09488 218 aa10.6□□□□□ -0.71
CALCOCO2-226ENST00000575461 ENDOUP21128 410 aaKnown RBP10.6□□□□□ -0.71
CALCOCO2-226ENST00000575461 IREB2P48200 963 aaKnown RBP10.6□□□□□ -0.71
CALCOCO2-226ENST00000575461 KSR2Q6VAB6 950 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms